BAC Information

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BAC

Clone NameB6Ng01-317F07
Chromosome15 (Build37)
Map Location 65,683,956 - 65,818,248
singlet/doubletdoublet
Overlap geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836
Downstream geneKcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317F07.bB6Ng01-317F07.g
ACCGA107503GA107504
length8461,111
definitionB6Ng01-317F07.b B6Ng01-317F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,683,956 - 65,684,801)(65,817,133 - 65,818,248)
sequence
gaattcttctgtggcatagtttttaaatgtttaatagcacttaagtatag
tctccttcaatgtttaaaattgaaagaaggctaaatattatcccaagtat
taagttgagtaacaaacacaattttccaaactgaaaatatgttcctattc
cccagtagtttcattgaaaataacagtttgcagggtccacctttgcagtt
ttccacctgcactctctgtaaatgtgttgcccctacctgtctccctggct
tcctctgtgtaagggtgtatcagcctgcctgacagacagcagccaagaca
gagttgacaggcatgtaatgtcgtacttgcagttgagcctgcacatggta
ccacatatgtgatgtgcatcttaaacttgtttcaaatactgatcctgaca
tactaacatcttgactgcccgacagggttccttcatatatttctttaggc
ttgtgcctatagtttctgtttcccaaacagaattttgttattaaaaagag
aatgtgataattttgcctaaagactcaagagaacatcgttgtttgttaat
ttcccccttgtaatcaggtgacttctggatacaaagccaagacaattgtt
actgcactgcctgggtcatttctggatcctctattgtcgccatccctcat
ggaagactatgagctgaggcagttagtcttggaagtaatgcacaacctaa
tggatcgccatgacaacagagcaaagctccgcggtatcaggtgactcacc
agactgggagggcttcaggagagcttttagttttctagttttctctcagt
cagtgtgttgaaatctgtgtgttggagcagcgggggggtggggggg
gaattctggtgccttgctccctggatttgtctccgtgctctgagtaggct
ctccacattctggcttacacgggaacacaactattccacaagtgcccttt
agtgctctttataatatggtttcctgtaatttttaaactgtatgtgtaat
ttatattctggctctgtccgatatttgacaactttaataggttgatttcc
atatatatattatgcaaacaattcttacctgatttttttatgttctatct
caaaatcaataaagattgcaccacttattaataaatggatgattcaatga
ttctgtgaaaaaatgtttccgaaatgcgtcagaacactctctggggttgt
gtaacacagggtcaaaggcacaggttgatgctacagaaaaatcttgaaaa
tattcatggcctactacaacaaaaaattatttcttgtccaaatgaagatc
catcgtagactgccacaatgcttaaaaataatgcaaagatttgttgtcct
ttttagcatggaatacactggaacccatttccatccacctatcaagcgta
gccagaaaatgagaaaatgtaaaagtcataccatcttattatctccctgg
gactcagtgactttctggtcacattttcattggccagaccttgtcatgtg
gtactaagaagcctgcacaggaagatgggatgtgtagtcttcagtagagc
tcaggatgaggaaatggtgttaaagccaaaaaactttccctagaatgact
agagttgcaaatatacacatgagaacaatttatttgcagaatttgccaaa
ggttgtcttcttactaatggtgcacatttcaaaataatcaactcagaata
tactgattcttggttgtgaattgggatattggtgagtacacaaaggtatg
ggtcaactttccaattttgtctcctaaacatttggatatctatgatcctt
gcttatataacattcttgcttttttttcatgtcaaactctattagttctg
tcaaaaaatacttgttattactaatagacatcactgaagtcctctacact
gtgccctagcaattgagttacactattttaacacagaataccaggaacta
cattggcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65683956_65684801
seq2: B6Ng01-317F07.b_45_890

seq1  GAATTCTTCTGTGGCATAGTTTTTAAATGTTTAATAGCACTTAAGTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTGGCATAGTTTTTAAATGTTTAATAGCACTTAAGTATAG  50

seq1  TCTCCTTCAATGTTTAAAATTGAAAGAAGGCTAAATATTATCCCAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCAATGTTTAAAATTGAAAGAAGGCTAAATATTATCCCAAGTAT  100

seq1  TAAGTTGAGTAACAAACACAATTTTCCAAACTGAAAATATGTTCCTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGAGTAACAAACACAATTTTCCAAACTGAAAATATGTTCCTATTC  150

seq1  CCCAGTAGTTTCATTGAAAATAACAGTTTGCAGGGTCCACCTTTGCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGTTTCATTGAAAATAACAGTTTGCAGGGTCCACCTTTGCAGTT  200

seq1  TTCCACCTGCACTCTCTGTAAATGTGTTGCCCCTACCTGTCTCCCTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTGCACTCTCTGTAAATGTGTTGCCCCTACCTGTCTCCCTGGCT  250

seq1  TCCTCTGTGTAAGGGTGTATCAGCCTGCCTGACAGACAGCAGCCAAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGTAAGGGTGTATCAGCCTGCCTGACAGACAGCAGCCAAGACA  300

seq1  GAGTTGACAGGCATGTAATGTCGTACTTGCAGTTGAGCCTGCACATGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGACAGGCATGTAATGTCGTACTTGCAGTTGAGCCTGCACATGGTA  350

seq1  CCACATATGTGATGTGCATCTTAAACTTGTTTCAAATACTGATCCTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATGTGATGTGCATCTTAAACTTGTTTCAAATACTGATCCTGACA  400

seq1  TACTAACATCTTGACTGCCCGACAGGGTTCCTTCATATATTTCTTTAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACATCTTGACTGCCCGACAGGGTTCCTTCATATATTTCTTTAGGC  450

seq1  TTGTGCCTATAGTTTCTGTTTCCCAAACAGAATTTTGTTATTAAAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTATAGTTTCTGTTTCCCAAACAGAATTTTGTTATTAAAAAGAG  500

seq1  AATGTGATAATTTTGCCTAAAGACTCAAGAGAACATCGTTGTTTGTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATAATTTTGCCTAAAGACTCAAGAGAACATCGTTGTTTGTTAAT  550

seq1  TTCCCCCTTGTAATCAGGTGACTTCTGGATACAAAGCCAAGACAATTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTTGTAATCAGGTGACTTCTGGATACAAAGCCAAGACAATTGTT  600

seq1  ACTGCACTGCCTGGGTCATTTCTGGATCCTCTATTGTCGCCATCCCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACTGCCTGGGTCATTTCTGGATCCTCTATTGTCGCCATCCCTCAT  650

seq1  GGAAGACTATGAGCTGAGGCAGTTAGTCTTGGAAGTAATGCACAACCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTATGAGCTGAGGCAGTTAGTCTTGGAAGTAATGCACAACCTAA  700

seq1  TGGATCGCCATGACAACAGAGCAAAGCTCCGCGGTATCAGGTGACTCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCGCCATGACAACAGAGCAAAGCTCCGCGGTATCAGGTGACTCACC  750

seq1  AGACTGGGAGGGCTTCAGGAGAGCTTTTAGTTTTCTAGTTTTCTCTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGGAGGGCTTCAGGAGAGCTTTTAGTTTTCTAGTTTTCTCTCAGT  800

seq1  CAGTGTGTTGAAATCTGTGTGTTGGAGCAGGCGGGGGGTGGGGGGG  846
      ||||||||||||||||||||||||||||||  ||||||||||||||
seq2  CAGTGTGTTGAAATCTGTGTGTTGGAGCAGCGGGGGGGTGGGGGGG  846

seq1: chr15_65817133_65818248
seq2: B6Ng01-317F07.g_66_1176 (reverse)

seq1  TGATGCCAATGTAG-TCCTGGTATTCTGTGGTAAAATAGTGTACCTCAAA  49
      |||||||||||||| ||||||||||||||| |||||||||||| ||||| 
seq2  TGATGCCAATGTAGTTCCTGGTATTCTGTGTTAAAATAGTGTAACTCAAT  50

seq1  TGCTA-GGCACAGTGTAGAGGAACTTCAGTGAATGTCTATTAAGTAATAA  98
      ||||| ||||||||||||||| ||||||||| ||||||||| |||||| |
seq2  TGCTAGGGCACAGTGTAGAGG-ACTTCAGTG-ATGTCTATT-AGTAAT-A  96

seq1  ACAAGTATTTTTTGAACAGAACTAAATAGAGTTTGACATGAAAAAAAAGC  148
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  ACAAGTATTTTTTG-ACAGAACT-AATAGAGTTTGACATGAAAAAAAAGC  144

seq1  AAGAATGTTATATAAGCAAGGATCATAGATATCCAAATGTTTAGGAGACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTTATATAAGCAAGGATCATAGATATCCAAATGTTTAGGAGACA  194

seq1  AAATTGGAAAGTTGACCCATACCTTTGTGTACTCACCAATATCCCAATTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGAAAGTTGACCCATACCTTTGTGTACTCACCAATATCCCAATTC  244

seq1  ACAACCAAGAATCAGTATATTCTGAGTTGATTATTTTGAAATGTGCACCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAGAATCAGTATATTCTGAGTTGATTATTTTGAAATGTGCACCA  294

seq1  TTAGTAAGAAGACAACCTTTGGCAAATTCTGCAAATAAATTGTTCTCATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAGAAGACAACCTTTGGCAAATTCTGCAAATAAATTGTTCTCATG  344

seq1  TGTATATTTGCAACTCTAGTCATTTCTAGGGAAAGTTTTTTGGCTTTAAC  398
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTATATTTGCAACTCTAGTCA-TTCTAGGGAAAGTTTTTTGGCTTTAAC  393

seq1  ACCATTTCCTCATCCTGAGCTCTACTGAAGACTACACATCCCATCTTCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCCTCATCCTGAGCTCTACTGAAGACTACACATCCCATCTTCCT  443

seq1  GTGCAGGCTTCTTAGTACCACATGACAAGGTCTGGCCAATGAAAATGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCTTCTTAGTACCACATGACAAGGTCTGGCCAATGAAAATGTGA  493

seq1  CCAGAAAGTCACTGAGTCCCAGGGAGATAATAAGATGGTATGACTTTTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGTCACTGAGTCCCAGGGAGATAATAAGATGGTATGACTTTTAC  543

seq1  ATTTTCTCATTTTCTGGCTACGCTTGATAGGTGGATGGAAATGGGTTCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCATTTTCTGGCTACGCTTGATAGGTGGATGGAAATGGGTTCCA  593

seq1  GTGTATTCCATGCTAAAAAGGACAACAAATCTTTGCATTATTTTTAAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCCATGCTAAAAAGGACAACAAATCTTTGCATTATTTTTAAGCA  643

seq1  TTGTGGCAGTCTACGATGGATCTTCATTTGGACAAGAAATAATTTTTTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCAGTCTACGATGGATCTTCATTTGGACAAGAAATAATTTTTTGT  693

seq1  TGTAGTAGGCCATGAATATTTTCAAGATTTTTCTGTAGCATCAACCTGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGGCCATGAATATTTTCAAGATTTTTCTGTAGCATCAACCTGTG  743

seq1  CCTTTGACCCTGTGTTACACAACCCCAGAGAGTGTTCTGACGCATTTCGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACCCTGTGTTACACAACCCCAGAGAGTGTTCTGACGCATTTCGG  793

seq1  AAACATTTTTTCACAGAATCATTGAATCATCCATTTATTAATAAGTGGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTTTCACAGAATCATTGAATCATCCATTTATTAATAAGTGGTG  843

seq1  CAATCTTTATTGATTTTGAGATAGAACATAAAAAAATCAGGTAAGAATTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTATTGATTTTGAGATAGAACATAAAAAAATCAGGTAAGAATTG  893

seq1  TTTGCATAATATATATATGGAAATCAACCTATTAAAGTTGTCAAATATCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAATATATATATGGAAATCAACCTATTAAAGTTGTCAAATATCG  943

seq1  GACAGAGCCAGAATATAAATTACACATACAGTTTAAAAATTACAGGAAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGCCAGAATATAAATTACACATACAGTTTAAAAATTACAGGAAAC  993

seq1  CATATTATAAAGAGCACTAAAGGGCACTTGTGGAATAGTTGTGTTCCCGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATAAAGAGCACTAAAGGGCACTTGTGGAATAGTTGTGTTCCCGT  1043

seq1  GTAAGCCAGAATGTGGAGAGCCTACTCAGAGCACGGAGACAAATCCAGGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCAGAATGTGGAGAGCCTACTCAGAGCACGGAGACAAATCCAGGG  1093

seq1  AGCAAGGCACCAGAATTC  1116
      ||||||||||||||||||
seq2  AGCAAGGCACCAGAATTC  1111