BAC Information

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BAC

Clone NameB6Ng01-319O03
Chromosome15 (Build37)
Map Location 55,816,234 - 55,817,253
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908
Downstream geneHba-ps3, Has2, EG594843, LOC435442, LOC100040067, LOC100039984
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319O03.bB6Ng01-319O03.g
ACCGA109403GA109404
length8131,032
definitionB6Ng01-319O03.b B6Ng01-319O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaaaatagggttatttggt
actctggatgaattcatgaaattcttaggcaaatggatggaacttgaaaa
tgtcatcctgagtgagggaacccaatcacaaaagaacacacatggtatac
actcactgataagtagatattagcccagaagctcggaatacccaagatac
aattcacagacaacatgaatctcaagaagaccaaagtgtggataatttgg
tccttcttagaagggggaacaaaatacccatgggaggagttacagaggca
aagtgtggagcagaaactaaaggaaaggccatccagtgctgtcccacctg
gggatccatcccatatacagttgccaaacccagacactattgtggatgcc
aacaagagcttgctgacaagagcctgatatagctgtctcctgagaggctc
tgccagtatctgacaaatacagaagtagatgctcacagcaaaccattgga
ctgagcagagggtccccaatggaggagctagagaaatgaccccaggagct
gaagtcagcatccccataagaggaacaacaatatgaaccaaccagtactc
ccagagctcccagggactaaaccaccaaccaaagagtacacctggaggga
ctcatgactccagctgcatatgtagcagaagatggccttgtgggacatca
atgagaggagaggcccttggtcctgtggaggttcgatgccccagtgtaag
gggacaccaggacagggatgctagagtgggtggattagtgagcaagttgg
ggggggggcgggt
gaattctagaacagctggtcttttcccatttagttcttagaagatgccat
tcaattgtcgccttacctgtattgtcttccattagaagtctgcagatgct
tgtcttttagtctgtattcaatacggttttgttttggctttggttttggt
tactttttagatctactttatatgtgtgagtgttttgcttacatgtatgt
atgcatgaaaaccacataggtcccttgtgcctgtggaggctagaagaagg
catctgatgccctgtaactggagttacagatggctatgaaccatcatgaa
ggtgttggaaatcaaactcaggtcatctgcaagaacaataaatgtccata
gtatgctaagccatctctccagtccctggaggttttgttgccattgttgg
actttcggttttttggtttatttttggtggcagtggtgggttggttggct
cttattgtttttgttttttagctcatttcaaggatttaacttttaagatt
tcctctctgtcatgagttttattgcttgactaggtaaggttttatttgtg
tccctgttgcttgtgtttctgttcaacatcttggatatgtagatttatag
ctttcatcaaacttttctttctcttctaattatcaaaaccctcaaattgc
acacaaattaatgtcttatgttgtgcctggggctcacttcatgtttaatc
ctttctctctcaagttgcaacacttccatggcaatggtttaatgctcatt
ttctatttctatgttaatcatctgtcaatctcctccagtcaaaatttatc
ttacacctgctattctatgtttaaatctttcatttctctcgctaggcttt
ggttctttaaaatctttgaaggttgttcatagtctgtttcacaaatcctc
catctaccagctgaagttctctgatgattaatatttactttcaaggtgga
aatttctattcttccactggtcttctttgtgtttgtctatttgtttgatg
cttgtttagatttttggtttgttcttggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55816234_55817253
seq2: B6Ng01-319O03.g_68_1098 (reverse)

seq1  AAACAAAGAACAAAACCAAAAAC-AAACAAGCATCAAACAAATAGACAAA  49
      |||| ||||||||| | |||| | ||||||||||||||||||||||||||
seq2  AAACCAAGAACAAACCAAAAATCTAAACAAGCATCAAACAAATAGACAAA  50

seq1  CACAAAGAAGACCAGTGGAGAAATAGAAATTTCAACCT--GAAGT-AATA  96
      |||||||||||||||||||  |||||||||||| ||||   |||| ||||
seq2  CACAAAGAAGACCAGTGGAAGAATAGAAATTTCCACCTTGAAAGTAAATA  100

seq1  -TAATCATCAGAG-ACCTCAGCTGGTAGATGGAG--ATTGTGAAACAGAC  142
       |||||||||||| || |||||||||||||||||   |||||||||||||
seq2  TTAATCATCAGAGAACTTCAGCTGGTAGATGGAGGATTTGTGAAACAGAC  150

seq1  TATGAAC-ACCTTC-AAGA-TTTAAAGAACCAAAGCCTAGCGAGAGAAAT  189
      ||||||| |||||| |||| ||||||||||||||||||||||||||||||
seq2  TATGAACAACCTTCAAAGATTTTAAAGAACCAAAGCCTAGCGAGAGAAAT  200

seq1  GAAAGATTTAAACATAGAATAGCAGGTGTAAGATAAATTTTGACTGGAGG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTTAAACATAGAATAGCAGGTGTAAGATAAATTTTGACTGGAGG  250

seq1  AGATTGACAGATGATTAACATAGAAATAGAAAATGAGCATTAAACCATTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGACAGATGATTAACATAGAAATAGAAAATGAGCATTAAACCATTG  300

seq1  CCATGGAAGTGTTGCAACTTGAGAGAGAAAGGATTAAACATGAAGTGAGC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAGTGTTGCAACTTGAGAGAGAAAGGATTAAACATGAAGTGAGC  350

seq1  CCCAGGCACAACATAAGACATTAATTTGTGTGCAATTTGAGGGTTTTGAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCACAACATAAGACATTAATTTGTGTGCAATTTGAGGGTTTTGAT  400

seq1  AATTAGAAGAGAAAGAAAAGTTTGATGAAAGCTATAAATCTACATATCCA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAGAGAAAGAAAAGTTTGATGAAAGCTATAAATCTACATATCCA  450

seq1  AGATGTTGAACAGAAACACAAGCAACAGGGACACAAATAAAACCTTACCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTGAACAGAAACACAAGCAACAGGGACACAAATAAAACCTTACCT  500

seq1  AGTCAAGCAATAAAACTCATGACAGAGAGGAAATCTTAAAAGTTAAATCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGCAATAAAACTCATGACAGAGAGGAAATCTTAAAAGTTAAATCC  550

seq1  TTGAAATGAGCTAAAAAACAAAAACAATAAGAGCCAACCAACCCACCACT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGAGCTAAAAAACAAAAACAATAAGAGCCAACCAACCCACCACT  600

seq1  GCCACCAAAAATAAACCAAAAAACCGAAAGTCCAACAATGGCAACAAAAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAAAAATAAACCAAAAAACCGAAAGTCCAACAATGGCAACAAAAC  650

seq1  CTCCAGGGACTGGAGAGATGGCTTAGCATACTATGGACATTTATTGTTCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGACTGGAGAGATGGCTTAGCATACTATGGACATTTATTGTTCT  700

seq1  TGCAGATGACCTGAGTTTGATTTCCAACACCTTCATGATGGTTCATAGCC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGACCTGAGTTTGATTTCCAACACCTTCATGATGGTTCATAGCC  750

seq1  ATCTGTAACTCCAGTTACAGGGCATCAGATGCCTTCTTCTAGCCTCCACA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAACTCCAGTTACAGGGCATCAGATGCCTTCTTCTAGCCTCCACA  800

seq1  GGCACAAGGGACCTATGTGGTTTTCATGCATACATACATGTAAGCAAAAC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGGGACCTATGTGGTTTTCATGCATACATACATGTAAGCAAAAC  850

seq1  ACTCACACATATAAAGTAGATCTAAAAAGTAACCAAAACCAAAGCCAAAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACATATAAAGTAGATCTAAAAAGTAACCAAAACCAAAGCCAAAA  900

seq1  CAAAACCGTATTGAATACAGACTAAAAGACAAGCATCTGCAGACTTCTAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCGTATTGAATACAGACTAAAAGACAAGCATCTGCAGACTTCTAA  950

seq1  TGGAAGACAATACAGGTAAGGCGACAATTGAATGGCATCTTCTAAGAACT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACAATACAGGTAAGGCGACAATTGAATGGCATCTTCTAAGAACT  1000

seq1  AAATGGGAAAAGACCAGCTGTTCTAGAATTC  1020
      |||||||||||||||||||||||||||||||
seq2  AAATGGGAAAAGACCAGCTGTTCTAGAATTC  1031