BAC Information

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BAC

Clone NameB6Ng01-319O21
Chromosome15 (Build37)
Map Location 55,400,003 - 55,401,090
singlet/doubletsinglet
Overlap geneMtbp
Upstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13
Downstream geneSntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319O21.bB6Ng01-319O21.g
ACCGA109439GA109440
length1,0961,181
definitionB6Ng01-319O21.b B6Ng01-319O21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcctgactcggttccagtctggtgtgacttcttagtactgta
gttgtgttgttctctaagccagggatgagcgtagtagctcataaggcttg
tttgacttacattattttgagtacacagtagtgacacaggaagacccgtc
tgtcagaattgtcacatctttactgttaacagtcgtactgctgctacttc
tatggtaactgtgtttctcatcaccacatgccctgaaggtaaaccatgtg
aggctcagtatcatgtgtctagtagtgaagaacacaggcagttctgtctg
actggcaggaagcaggcattgaatgtgcaccaacgaggttgcttgaaatg
agttagtatactgctgctgactaacccagggtgactgaaagctttttatg
aaaaactgctgtttaagttaatagtaaaatgtgtacttagcaggaacaac
tacccgttgagctgaggtattaaaaaaaattcacatttgtgtatctattt
atagtaaggtcagtttcttctcaatattttcattctaataaaatatatcc
atctttattcataacacctataattgagttcttttggtttcttttcagtt
tggatttgaaattagttttcctgaattttgtttaaaaggagttacgccta
cgaatgttagtgcgtataatttaaatacctgcttccttgccaagaagata
gcatcttctaaggtaagaatatgttgcctaagggtaaggtatagacattt
aatctttttcctatcatccatttgtgcatgcttttctatgaaatattttt
gagtcttgacttactaatacgtatgatgatctgtgctcacccgcatagct
catataactctaacagttgtgtgtttgagttacattgtgtgatgagcatt
atacattggcgagactgattgctatagagttttttttttaatgatgtgaa
taattttaagtcagtgtaagccctgaatgatcttgagttggagggtacta
cgtgacttctttttagttcagtggagctagaataggccctggggtttgaa
cttgactcctcttactgcctgtattatggatacagcctcaggtaga
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatgaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgacccgaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtctcttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacattggtgctggc
acaactgggttgtatcatgtagaagaatgcgaaatcgatccatacttatc
ctccttgtactaaggtccaaatctaaatggatcaagaacttccacataaa
acccagaagacacctgaaactatagaggagaaaggtgggtaaagctgaga
attggcacaaggaaagtctgaacgaattgcagtggcctgtgtctgtaaga
aatcgggaaaaattgtgcccatctggtggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55400003_55401090
seq2: B6Ng01-319O21.b_46_1141

seq1  GAATTCAATCCTGACTCGGTTCCAGTCTGGTGTGACTTCTTAGTACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCTGACTCGGTTCCAGTCTGGTGTGACTTCTTAGTACTGTA  50

seq1  GTTGTGTTGTTCTCTAAGCCAGGGATGAGCGTAGTAGCTCATAAGGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTGTTCTCTAAGCCAGGGATGAGCGTAGTAGCTCATAAGGCTTG  100

seq1  TTTGACTTACATTATTTTGAGTACACAGTAGTGACACAGGAAGACCCGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTACATTATTTTGAGTACACAGTAGTGACACAGGAAGACCCGTC  150

seq1  TGTCAGAATTGTCACATCTTTACTGTTAACAGTCGTACTGCTGCTACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAATTGTCACATCTTTACTGTTAACAGTCGTACTGCTGCTACTTC  200

seq1  TATGGTAACTGTGTTTCTCATCACCACATGCCCTGAAGGTAAACCATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAACTGTGTTTCTCATCACCACATGCCCTGAAGGTAAACCATGTG  250

seq1  AGGCTCAGTATCATGTGTCTAGTAGTGAAGAACACAGGCAGTTCTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGTATCATGTGTCTAGTAGTGAAGAACACAGGCAGTTCTGTCTG  300

seq1  ACTGGCAGGAAGCAGGCATTGAATGTGCACCAACGAGGTTGCTTGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGGAAGCAGGCATTGAATGTGCACCAACGAGGTTGCTTGAAATG  350

seq1  AGTTAGTATACTGCTGCTGACTAACCCAGGGTGACTGAAAGCTTTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTATACTGCTGCTGACTAACCCAGGGTGACTGAAAGCTTTTTATG  400

seq1  AAAAACTGCTGTTTAAGTTAATAGTAAAATGTGTACTTAGCAGGAACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCTGTTTAAGTTAATAGTAAAATGTGTACTTAGCAGGAACAAC  450

seq1  TACCCGTTGAGCTGAGGTATTAAAAAAAATTCACATTTGTGTATCTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGTTGAGCTGAGGTATTAAAAAAAATTCACATTTGTGTATCTATTT  500

seq1  ATAGTAAGGTCAGTTTCTTCTCAATATTTTCATTCTAATAAAATATATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAGGTCAGTTTCTTCTCAATATTTTCATTCTAATAAAATATATCC  550

seq1  ATCTTTATTCATAACACCTATAATTGAGTTCTTTTGGTTTCTTTTCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATTCATAACACCTATAATTGAGTTCTTTTGGTTTCTTTTCAGTT  600

seq1  TGGATTTGAAATTAGTTTTCCTGAATTTTGTTTAAAAGGAGTTACGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGAAATTAGTTTTCCTGAATTTTGTTTAAAAGGAGTTACGCCTA  650

seq1  CGAATGTTAGTGCGTATAATTTAAATACCTGCTTCCTTGCCAAGAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGTTAGTGCGTATAATTTAAATACCTGCTTCCTTGCCAAGAAGATA  700

seq1  GCATCTTCTAAGGTAAGAATATGTTGCCTAA-GGTAAGGTATAGACATTT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCATCTTCTAAGGTAAGAATATGTTGCCTAAGGGTAAGGTATAGACATTT  750

seq1  AATCTTTTTCCTATCATCCATTTGTGCATGCTTTTCTATGAAATATTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCCTATCATCCATTTGTGCATGCTTTTCTATGAAATATTTTT  800

seq1  GAGTCTTGACTTACTAATACGTATGATGATCTGTGCTCACCCGCATAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTGACTTACTAATACGTATGATGATCTGTGCTCACCCGCATAGCT  850

seq1  CATATAACTCTAACAGTTGTGTGTTTGAGTTACATTGTGTGATGAGCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAACTCTAACAGTTGTGTGTTTGAGTTACATTGTGTGATGAGCATT  900

seq1  ATACATTGGCGAGACTGATTGCTATAGAGTTTTTTTTTTAATGATGTG-A  948
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATACATTGGCGAGACTGATTGCTATAGAGTTTTTTTTTTAATGATGTGAA  950

seq1  TAATTTTAAAGTCAGTGTAAG-CCTGAATGATCTTGAGTTGGAGGGTACT  997
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  TAATTTT-AAGTCAGTGTAAGCCCTGAATGATCTTGAGTTGGAGGGTACT  999

seq1  ACGTGAC-TCTTTTAAGTTCAGT-GAGCTAG-ATAGG-CCTGGGTTTGAA  1043
      ||||||| |||||| |||||||| ||||||| ||||| |||||| ||  |
seq2  ACGTGACTTCTTTTTAGTTCAGTGGAGCTAGAATAGGCCCTGGGGTTTGA  1049

seq1  ACTTGACT-CTCTACCTG-CTGTATATTGGATACAGCCTCAGTTAGA  1088
      |||||||| ||||  ||| ||||||  ||||||||||||||| ||||
seq2  ACTTGACTCCTCTTACTGCCTGTATTATGGATACAGCCTCAGGTAGA  1096