BAC Information

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BAC

Clone NameB6Ng01-320A19
Chromosome15 (Build37)
Map Location 5,967,729 - 5,968,826
singlet/doubletsinglet
Overlap genenone
Upstream geneC7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358
Downstream geneLOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320A19.bB6Ng01-320A19.g
ACCGA109522GA109523
length1,2111,091
definitionB6Ng01-320A19.b B6Ng01-320A19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaggtacatctctcgagaatgtgctgccaattagtgggttac
atgaaggaactgctttttgttttaagagcaaagtaataaaaggataaaag
gatgcatttattcctatggtcatattataaacaaacaaacaaataaataa
acaagtagacatcttcacatttcttgtaaagcactgaactgatgaattac
ttcttaatatgtttttaaatgaattacaataaattttaggtgtatgctgt
ttaaaatagactgaattattggaaatgtaattgaggaaaatgcgtaataa
aaaatagactgaattttgtcaaaatttcaataattaaattaagatgcact
cctcttccagtttcctttaaaaacaaaacaaaacaacaacaacaacaacc
aaacctcctagggatatctactgaacatagcacaaggcatgatgagacta
ggcacaaactcttatatcgatgctggatggggcaacccagtagggagaaa
agggtcccaagagcaggcaaaagagtcagagataccccttccccccaact
tccactcagtcccacaagaacaccaagacacacaaccataacatgaatgc
aaagacctagctctgaaccatgcaggctccgtgattgtttcttcagtctc
tgtgaactgctatgaggcctgcttacttgattctgtggaccatattctat
catgtcttccaaccctctagcacttgtgattcttcctttccctcttctat
agggttcactcaattccacctactccttggctgtgggtctctgcatctgc
tcccatctgttgctagatgaagcctatctgatgttaggctcctgactatg
agtatagcagaatattgttagaaatcatcttattaacttttttggtcagt
tgtgtttggttctattctaggtctctgggctatatagtctctggttcctg
gctatccaggcaacaccaggtcttggctccctctggtggcataggcttca
attgaactattagttggccactctacagttctgactccaccattaccaga
gcatcttgcaagcaggacaattgtagtcgacgatttatgctaggtgatgt
cctagtagtccactgcctgtttttcaagaggggcttgctagttctggtat
tctccactagccagaaggtctcttgtggtatgaaggatcactccttcttt
cgtggagattc
gaattccttgataatagagagcagagggagatttgactgcataagagggg
ggaaaaaagccctatgatagtaacagacagtcagtcaaaggaaaaacgtg
ctagttctgactttgaagacactggggacgtgagctcagggaagcagcag
aagttggaaagagtgcgatgttgtaacatgctgttccaggaagccacact
gtgcgagaccttgatttctgctttatcaaaagcagacatttaggacatcc
cacatccagactattaaagaataaaagtgttatgctttgaactactaaac
tatgaccatttgttaccaaaaatatagaaaaataacctatgaattaaata
tcatctctattctgaatgtagagatgacaagtcgcagtcagacagaaagc
agttaacttgcatcatgagttttatcttgtaggagttgggatgacaacac
tggcaagctgactctatctagcacatttgtgactgataaaaatgtggctg
tcagagagacttcctgctgttttattttttcagagtcagattaaaggcat
gctgagtttttctggttaactgcaacttctgattttaagctggatactta
gcacccaatgaccatggcttaaattaaaaatattgagggcattgttcaag
cataatatctccttattcagcaagccattaacatctgacttctgacatga
gtaagtgctgtactcagaccaaactgagattttgatattgccttctgcac
aacagatcacatttcctcaataaaataattaaaagccaattaacttgagt
tctgtctgcatcaagatcagaagtgtagcctgggtgtggtggcgcacgcc
tttaatcctgcactcagtgtcagaggcagggtggatttctgagttctagg
ccagcctggtctacaaaatgagttccaggacagccagggctatacaaaga
aaccctgtcttcgaagaccaaaacaacaacaacgatcaaacaaagatcag
agtgcagttcttacagaaatctttctgtgcactgaagtgagtataaaaaa
tattattctaatgctagaagccttaatcatctgtcctcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5967729_5968826
seq2: B6Ng01-320A19.g_65_1155

seq1  GAATTCCTTGATAATAGAGAGCAGAGGGAGATTTGACTGCATAAGAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGATAATAGAGAGCAGAGGGAGATTTGACTGCATAAGAGGGG  50

seq1  GGAAAAAAGCCCTATGATAGTAACAGACAGTCAGTCAAAGGAAAAACGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAGCCCTATGATAGTAACAGACAGTCAGTCAAAGGAAAAACGTG  100

seq1  CTAGTTCTGACTTTGAAGACACTGGGGACGTGAGCTCAGGGAAGCAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTGACTTTGAAGACACTGGGGACGTGAGCTCAGGGAAGCAGCAG  150

seq1  AAGTTGGAAAGAGTGCGATGTTGTAACATGCTGTTCCAGGAAGCCACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGAAAGAGTGCGATGTTGTAACATGCTGTTCCAGGAAGCCACACT  200

seq1  GTGCGAGACCTTGATTTCTGCTTTATCAAAAGCAGACATTTAGGACATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGAGACCTTGATTTCTGCTTTATCAAAAGCAGACATTTAGGACATCC  250

seq1  CACATCCAGACTATTAAAGAATAAAAGTGTTATGCTTTGAACTACTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCAGACTATTAAAGAATAAAAGTGTTATGCTTTGAACTACTAAAC  300

seq1  TATGACCATTTGTTACCAAAAATATAGAAAAATAACCTATGAATTAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCATTTGTTACCAAAAATATAGAAAAATAACCTATGAATTAAATA  350

seq1  TCATCTCTATTCTGAATGTAGAGATGACAAGTCGCAGTCAGACAGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTATTCTGAATGTAGAGATGACAAGTCGCAGTCAGACAGAAAGC  400

seq1  AGTTAACTTGCATCATGAGTTTTATCTTGTAGGAGTTGGGATGACAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTTGCATCATGAGTTTTATCTTGTAGGAGTTGGGATGACAACAC  450

seq1  TGGCAAGCTGACTCTATCTAGCACATTTGTGACTGATAAAAATGTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGCTGACTCTATCTAGCACATTTGTGACTGATAAAAATGTGGCTG  500

seq1  TCAGAGAGACTTCCTGCTGTTTTATTTTTTCAGAGTCAGATTAAAGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGACTTCCTGCTGTTTTATTTTTTCAGAGTCAGATTAAAGGCAT  550

seq1  GCTGAGTTTTTCTGGTTAACTGCAACTTCTGATTTTAAGCTGGATACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTTTTCTGGTTAACTGCAACTTCTGATTTTAAGCTGGATACTTA  600

seq1  GCACCCAATGACCATGGCTTAAATTAAAAATATTGAGGGCATTGTTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCAATGACCATGGCTTAAATTAAAAATATTGAGGGCATTGTTCAAG  650

seq1  CATAATATCTCCTTATTCAGCAAGCCATTAACATCTGACTTCTGACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATCTCCTTATTCAGCAAGCCATTAACATCTGACTTCTGACATGA  700

seq1  GTAAGTGCTGTACTCAGACCAAACTGAGATTTTGATATTGCCTTCTGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGCTGTACTCAGACCAAACTGAGATTTTGATATTGCCTTCTGCAC  750

seq1  AACAGATCACATTTCCTCAATAAAATAATTAAAAGCCAATTAACTTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCACATTTCCTCAATAAAATAATTAAAAGCCAATTAACTTGAGT  800

seq1  TCTGTCTGCATCAAGATCAGAAGTGTAAGCTGGGTGTGGTGGCGCACGCC  850
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TCTGTCTGCATCAAGATCAGAAGTGTAGCCTGGGTGTGGTGGCGCACGCC  850

seq1  TTTAATCCTGCACTCAGGTGTCAGAGGCA-GGTGGATTTCTGAGTTCTAG  899
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  TTTAATCCTGCACTCA-GTGTCAGAGGCAGGGTGGATTTCTGAGTTCTAG  899

seq1  GCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGCCAGGGCTATACAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGCCAGGGCTATACAAAG  949

seq1  AAACCCTGTCTCGAAAAACCAAAAACAAACAAACAAACAAACAAACAAAA  999
      |||||||||||   || |||||||   |||||   ||| | |||||  ||
seq2  AAACCCTGTCTTCGAAGACCAAAA--CAACAA--CAACGATCAAAC--AA  993

seq1  AGATCAGAAGTGCAGTTC-TACAGAAATCTTTCTGTGCACTGAAAGTGAG  1048
      ||||||| |||||||||| ||||||||||||||||||||||| |||||||
seq2  AGATCAG-AGTGCAGTTCTTACAGAAATCTTTCTGTGCACTG-AAGTGAG  1041

seq1  TATAAAAATAATTATTTCTAATGCTAGAAGGC-TAATCATCTGTCCTCAC  1097
      ||||||||  |||| ||||||||||||||| | |||||||||||||||||
seq2  TATAAAAAATATTA-TTCTAATGCTAGAAGCCTTAATCATCTGTCCTCAC  1090

seq1  T  1098
      |
seq2  T  1091