BAC Information

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BAC

Clone NameB6Ng01-320M10
Chromosome15 (Build37)
Map Location 28,108,733 - 28,109,916
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126
Downstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320M10.bB6Ng01-320M10.g
ACCGA110059GA110060
length1,1801,149
definitionB6Ng01-320M10.b B6Ng01-320M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagcatccatgttgcctgcagagggcctgcctgcataagaccg
aacctgttgacactcggtcatagatgggtcatagggtctcatctcactca
cgggaggtattggtagtctagagctgctgggggacaggaagccactggtg
agtcactcacactcggcctctaagacgatccttacttgtttggtttacta
aagacccatgtctctatgcgagtccctggttagcttcgtgagccacaagg
gtagagggaggagctgcccggtgtgagagtaagatgttagagggtgaagg
agtttgtgtgaccagaatgtgtcatctacgcatgtaaaactgtcaaaaag
taaattaagaaaaggacatatgtacttaggtacatataacacgagatatg
gcatgagaagtaaaaaaaaaatgacaaaaattataaaggcatggtcaaaa
caagagagaggtgggagtgactgctttatgggtccttgaaagctgggatc
tgctgggtcaaggagtgtgtgtccagttgaaactgaaggctcttgtcttt
tctgctgttaagaatattagtaactggacccgtcatgtgtcaaatgtctc
tttcttttagacgtgtccttccgttacatttagaagctgcaactggctgc
cattaggaatgtcttcttccatggccaggacaggttcttccacattcctg
gacttccagttcacactgctccgggtggggaatgtgtcttgagggcattg
tgggtaggagaaacagacagaacactgacatcttatatatgagagctact
tcctgtggtttttaaaacccactcagcattaagtacctacctccactggc
gggggattaagtctgcagaatttaatactttagagttctctgtctctatg
ccagcacgctggctggctccagagactggtttaccttctgaccttcagct
cagatctttttagtctctgtcataagcctcaggtgatgggctgagctatt
tgaccctgaggtcaggctactgcatcagattcttcttttagttgcccaac
catatgacaaagggggaaacccctcaaattcttacgtaagccactctggg
actttctctcagttacttaccagcttagttaactgagtccagtctgctaa
ggttcgtgacttggtacacaacaggtgaga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaacatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatgaaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggagcctagcaaa
cacagaagtgggatgcccacagtcagctaatggatggatcacagggctcc
caatggaggagctagagaagtacccagagctaaaggatctgcacctatag
tgatcacattatgaactacagtaccccgagctcttgactctagctgcata
tggtatccaaagattgcttagttcgtcaatcactggaagagagtcaatgg
aaaccccaactaatgccagacggaacgcaggtcaaacgggaattggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28108733_28109916
seq2: B6Ng01-320M10.b_48_1227

seq1  GAATTCACAGCATCCATGTTGCCTGCAGAGGGCCTGCCTGCATAAGACCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCATCCATGTTGCCTGCAGAGGGCCTGCCTGCATAAGACCG  50

seq1  AACCTGTTGACACTCGGTCATAGATGGGTCATAGGGTCTCATCTCACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTGACACTCGGTCATAGATGGGTCATAGGGTCTCATCTCACTCA  100

seq1  CGGGAGGTATTGGTAGTCTAGAGCTGCTGGGGGACAGGAAGCCACTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGTATTGGTAGTCTAGAGCTGCTGGGGGACAGGAAGCCACTGGTG  150

seq1  AGTCACTCACACTCGGCCTCTAAGACGATCCTTACTTGTTTGGTTTACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCACACTCGGCCTCTAAGACGATCCTTACTTGTTTGGTTTACTA  200

seq1  AAGACCCATGTCTCTATGCGAGTCCCTGGTTAGCTTCGTGAGCCACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCATGTCTCTATGCGAGTCCCTGGTTAGCTTCGTGAGCCACAAGG  250

seq1  GTAGAGGGAGGAGCTGCCCGGTGTGAGAGTAAGATGTTAGAGGGTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGGAGGAGCTGCCCGGTGTGAGAGTAAGATGTTAGAGGGTGAAGG  300

seq1  AGTTTGTGTGACCAGAATGTGTCATCTACGCATGTAAAACTGTCAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGTGACCAGAATGTGTCATCTACGCATGTAAAACTGTCAAAAAG  350

seq1  TAAATTAAGAAAAGGACATATGTACTTAGGTACATATAACACGAGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAGAAAAGGACATATGTACTTAGGTACATATAACACGAGATATG  400

seq1  GCATGAGAAGTAAAAAAAAAATGACAAAAATTATAAAGGCATGGTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAAGTAAAAAAAAAATGACAAAAATTATAAAGGCATGGTCAAAA  450

seq1  CAAGAGAGAGGTGGGAGTGACTGCTTTATGGGTCCTTGAAAGCTGGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGGTGGGAGTGACTGCTTTATGGGTCCTTGAAAGCTGGGATC  500

seq1  TGCTGGGTCAAGGAGTGTGTGTCCAGTTGAAACTGAAGGCTCTTGTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTCAAGGAGTGTGTGTCCAGTTGAAACTGAAGGCTCTTGTCTTT  550

seq1  TCTGCTGTTAAGAATATTAGTAACTGGACCCGTCATGTGTCAAATGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTTAAGAATATTAGTAACTGGACCCGTCATGTGTCAAATGTCTC  600

seq1  TTTCTTTTAGACGTGTCCTTCCGTTACATTTAGAAGCTGCAACTGGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTAGACGTGTCCTTCCGTTACATTTAGAAGCTGCAACTGGCTGC  650

seq1  CATTAGGAATGTCTTCTTCCATGGCCAGGACAGGTTCTTCCACATTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGAATGTCTTCTTCCATGGCCAGGACAGGTTCTTCCACATTCCTG  700

seq1  GACTTCCAGTTCACACTGCTCCGGGTGGGGAATGTGTCTTGAGGGCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCAGTTCACACTGCTCCGGGTGGGGAATGTGTCTTGAGGGCATTG  750

seq1  TGGGTAGGAGAAACAGACAGAACACTGACATCTTATATATGAGAGCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGAGAAACAGACAGAACACTGACATCTTATATATGAGAGCTACT  800

seq1  TCCTGTGGTTTTTAAAACCCACTCAGCATTAAGTACCTACCTCCACTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGGTTTTTAAAACCCACTCAGCATTAAGTACCTACCTCCACTGGC  850

seq1  GGGGGATTAAGTCTGCAGAATTTAATAC-TTAGAGTTCTCTGTCTCTATG  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGGGGATTAAGTCTGCAGAATTTAATACTTTAGAGTTCTCTGTCTCTATG  900

seq1  CCAGCACGCTGGCTGGCTCCAGAGACTGGTTTACCTTCTGACCTCAGGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  CCAGCACGCTGGCTGGCTCCAGAGACTGGTTTACCTTCTGACCTTCAGCT  950

seq1  CAGATC-TTTTAGTCTCTGTCATAAGCCTCAGGTGATGGGCTGAGCTATT  998
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTTTTAGTCTCTGTCATAAGCCTCAGGTGATGGGCTGAGCTATT  1000

seq1  TGACCCTGAGGTCAGGGCTACTGCATCAGATTCTTC-TCTAG-TGCCCAA  1046
      |||||||||||||| ||||||||||||||||||||| | ||| |||||||
seq2  TGACCCTGAGGTCA-GGCTACTGCATCAGATTCTTCTTTTAGTTGCCCAA  1049

seq1  -CATATGACAAAGGGGGAAAACCCCTCAAAATCCTACGTAAGCCAACTCT  1095
       |||||||||||||||| |||||||||||| || |||||||||| |||| 
seq2  CCATATGACAAAGGGGG-AAACCCCTCAAATTCTTACGTAAGCC-ACTC-  1096

seq1  TGGGACCTTCCTTCCTCAAGTACCTACCAGCTTATGTTTACATGAGTCCA  1145
      |||||| |||    ||||  ||| |||||||||| ||| || ||||||||
seq2  TGGGACTTTC---TCTCAGTTACTTACCAGCTTA-GTTAAC-TGAGTCCA  1141

seq1  GTCTGTGTTAAGTCCCGTTGACTTGGGAC---ACAGGTGAGA  1184
      |||  || ||||   || |||||||| ||   ||||||||||
seq2  GTC--TGCTAAGGTTCG-TGACTTGGTACACAACAGGTGAGA  1180


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