BAC Information

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BAC

Clone NameB6Ng01-322H15
Chromosome15 (Build37)
Map Location 43,567,642 - 43,568,751
singlet/doubletsinglet
Overlap genenone
Upstream geneRspo2, LOC675960, Eif3s6, Ttc35
Downstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322H15.bB6Ng01-322H15.g
ACCGA111308GA111309
length1,1891,116
definitionB6Ng01-322H15.b B6Ng01-322H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgcccaatttttaatggggttattcggttt
tctggagtccatcttcttgagttctctctctctctctctctctctctcta
tatatatatatatatatatagagagagagagagagagagagagattagtc
ccctatctgatttaggattggtagagatcctttcccaatctgttggtggc
ctttttgtcttattgacagtgtcttttgccttacagaagctttgcaattt
tatgaggtcccatttgtcaattctcgatcttaaagcacaagccatgggtg
ttctattcaggaatttttccccatatctttgcccatatctatgcccatat
ctttccccatatctatgcccatatctttgaggcttttgcccactttctcc
tctataattttcagcgtctctggttttatgtgaagttccttgatccactt
agacttgaccttaatacaaggagataagaatagatcagttcacattcttg
tacatgataaccgtcagttgtgccagcaccatttgttgaaaatgctgtct
tttttccactagatggttttagctcccttgtcaaagatcaagtgaccata
ggtgtgtgggctcatttctgggtcttcaattctattccattggtctacct
gtctgttgctgtaccagtaccatgcagtttttatcacaattgctctatag
tagtaccacttgaggtcaggcatggtgattccaccagagattcttttatc
attgagaagagtttttgctatcctaggttttttgtaattccggatgaatt
tgcaaattgccctttctaattcgttgaagaattgagttgaaattttgatg
gggattgcattgaatctgaagattgctttcggcaacatagccattttcat
tatattgttcctgccagtccatgagcatgggagatctttccattttctga
gatcttctttgattactttcttcagagacttgaagttcttattattcaga
tcttcacttcccttagtagagtccacaccaggtattttatattatttgtg
actattggtgacgggtgttgctttccttatttctttcctcagccttgtct
atttcctttgtgtagagaaaaggccatgattggttgagttagtgaaatca
gcctaccatcactgaagaccgtttattacaggttaatga
gaattcttccgtggttgtaagaagtaacagaaaaggaatcaggttgtgtg
gaagtctgtgtacctgtactctagagaaaccacggagcacacatggccaa
aagaatccatacttacatgaaaattaccttacatttagctatgtgttcat
gagtttaaaacaaaagcagcaaagcttgtgaacacaaaagaatattacct
agttcgtatacaacctctagacatctctcttgtggagagttggctaccag
gccagtatggcaaggcaatgctttcactcatgatttatttgctttacgtc
ctgactcctggggttttgacacagaccttaaataggcctcctgacattca
gtggagacggtgtggtgtgggtgctgaatctccccaagtaaaatggctca
tgggttccttttccagagacttcttaagactctatacacctcttctagag
caacaagttctatgtatgaaggaactgtgcttgttgatgggtagcactat
gctacttcaagcctcagcactctccccttagacaagagttcagcttcttt
cttcccttccatgactcttcacagaaggcccaaatggctacagcatcatc
ctttcttttcctttgaaatgttgtgcccagtacatcatgaattgtgaaaa
aacacagtgttgtctactaatctcccagtcactgggcagccagatctctc
tatatttgaaaccaagtaggcaagtgtgaatgtgctctgtcttctgaaga
aaggattaagcaaccacaacctcagtggcttctttatccccttaggagag
tgggcactgttttcatagtaacaaaccacactttttctgctccacaaaat
tctaatgccgtcaagtatggtaagacagatgatcctacttaaaatgatac
tttacaaagaaaaacagatataactcagtaactgtgcatctaattgcctt
aatttgcctcatttatcacatgacttaagtgagctgatgtttcctacttt
gcttcacccatgtaattcttgtaatagtagagctgagatgcagtgcaggc
atgagcgagaaaatacttcttctcctgagaaaagatttcatgggaggtga
tgttgggatttaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43567642_43568751
seq2: B6Ng01-322H15.g_66_1181

seq1  GAATTCTTCCGTGGTTGTAAGAAGTAACAGAAAAGGAATCAGGTTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCGTGGTTGTAAGAAGTAACAGAAAAGGAATCAGGTTGTGTG  50

seq1  GAAGTCTGTGTACCTGTACTCTAGAGAAACCACGGAGCACACATGGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTGTGTACCTGTACTCTAGAGAAACCACGGAGCACACATGGCCAA  100

seq1  AAGAATCCATACTTACATGAAAATTACCTTACATTTAGCTATGTGTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCATACTTACATGAAAATTACCTTACATTTAGCTATGTGTTCAT  150

seq1  GAGTTTAAAACAAAAGCAGCAAAGCTTGTGAACACAAAAGAATATTACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAAAACAAAAGCAGCAAAGCTTGTGAACACAAAAGAATATTACCT  200

seq1  AGTTCGTATACAACCTCTAGACATCTCTCTTGTGGAGAGTTGGCTACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTATACAACCTCTAGACATCTCTCTTGTGGAGAGTTGGCTACCAG  250

seq1  GCCAGTATGGCAAGGCAATGCTTTCACTCATGATTTATTTGCTTTACGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATGGCAAGGCAATGCTTTCACTCATGATTTATTTGCTTTACGTC  300

seq1  CTGACTCCTGGGGTTTTGACACAGACCTTAAATAGGCCTCCTGACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCTGGGGTTTTGACACAGACCTTAAATAGGCCTCCTGACATTCA  350

seq1  GTGGAGACGGTGTGGTGTGGGTGCTGAATCTCCCCAAGTAAAATGGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACGGTGTGGTGTGGGTGCTGAATCTCCCCAAGTAAAATGGCTCA  400

seq1  TGGGTTCCTTTTCCAGAGACTTCTTAAGACTCTATACACCTCTTCTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCTTTTCCAGAGACTTCTTAAGACTCTATACACCTCTTCTAGAG  450

seq1  CAACAAGTTCTATGTATGAAGGAACTGTGCTTGTTGATGGGTAGCACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGTTCTATGTATGAAGGAACTGTGCTTGTTGATGGGTAGCACTAT  500

seq1  GCTACTTCAAGCCTCAGCACTCTCCCCTTAGACAAGAGTTCAGCTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTCAAGCCTCAGCACTCTCCCCTTAGACAAGAGTTCAGCTTCTTT  550

seq1  CTTCCCTTCCATGACTCTTCACAGAAGGCCCAAATGGCTACAGCATCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCCATGACTCTTCACAGAAGGCCCAAATGGCTACAGCATCATC  600

seq1  CTTTCTTTTCCTTTGAAATGTTGTGCCCAGTACATCATGAATTGTGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTCCTTTGAAATGTTGTGCCCAGTACATCATGAATTGTGAAAA  650

seq1  AACACAGTGTTGTCTACTAATCTCCCAGTCACTGGGCAGCCAGATCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTGTTGTCTACTAATCTCCCAGTCACTGGGCAGCCAGATCTCTC  700

seq1  TATATTTGAAACCAAGTAGGCAAGTGTGAATGTGCTCTGTCTTCTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGAAACCAAGTAGGCAAGTGTGAATGTGCTCTGTCTTCTGAAGA  750

seq1  AAGGATTAAGCAACCACAACCTCAGTGGCTTCTTTATCCCCTTAGGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTAAGCAACCACAACCTCAGTGGCTTCTTTATCCCCTTAGGAGAG  800

seq1  TGGGCACTGTTTTCATAGTAACAAACCACACTTTTTCTGCTCCACAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACTGTTTTCATAGTAACAAACCACACTTTTTCTGCTCCACAAAAT  850

seq1  TCTAATGCCGTCAAGTATGGTAAGACAGATGATCCTACTTAAAATGATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGCCGTCAAGTATGGTAAGACAGATGATCCTACTTAAAATGATAC  900

seq1  TTTACAAAGAAAAACAGATATAACTCAGTAACTGTGCATCTAATTGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGAAAAACAGATATAACTCAGTAACTGTGCATCTAATTGCCTT  950

seq1  AA-TTGCCTCATTTATCACATGACTTAAGTGAGCTGATGTTTCCTACTTT  999
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCCTCATTTATCACATGACTTAAGTGAGCTGATGTTTCCTACTTT  1000

seq1  GCTTCACCCATGTAATTCTTGTAATAGTAGAGCTGAGATGCAGTGCCAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTTCACCCATGTAATTCTTGTAATAGTAGAGCTGAGATGCAGTG-CAGG  1049

seq1  CATGAGCGAG-AAATACT--CTCTCCTGAGAAAAGATATCATGG--AGTG  1094
      |||||||||| |||||||   |||||||||||||||| ||||||   |||
seq2  CATGAGCGAGAAAATACTTCTTCTCCTGAGAAAAGATTTCATGGGAGGTG  1099

seq1  ATGTT-GGATTTGGGTT  1110
      ||||| |||||| ||||
seq2  ATGTTGGGATTTAGGTT  1116