BAC Information

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BAC

Clone NameB6Ng01-326P12
Chromosome15 (Build37)
Map Location 12,513,523 - 12,691,730
singlet/doubletdoublet
Overlap genePdzd2
Upstream geneLOC100039772, Npr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, LOC100040109
Downstream gene6030458C11Rik, Rnasen, Cdh6, LOC100039907, LOC666686, LOC239338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326P12.bB6Ng01-326P12.g
ACCGA114638GA114639
length447755
definitionB6Ng01-326P12.b B6Ng01-326P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,513,523 - 12,513,975)(12,690,977 - 12,691,730)
sequence
attcaagggagctcacaaggacagggtcgccaaagacactaagtgtttgc
ttgtttgtgtgtttattccttcaaggtatcttgtctgtcttgggctggtc
catctctgatcattcttcaagcatcaggcaggacttttcaggagtgcata
tctggactgccgtgactcgccctcaggtttgacagagattggttttatat
gggttgagtctttagggatatctctttcccatctgctccctcacagctgt
cctttcagagcttttgtgagtagacacctgtgttggcaaaggccaaggct
tttctaataaatatcgattcctttcatcctgtctaacctcatacccagct
caaggaagggctgactgaacggttacccaagccgtggaaagagctcagcc
tccttcatctccttcccctcctcaaagggggatgggggggggagaaa
gaattccttcggaaagctttgagtgtttagttaataggaagagcgtaagt
gggctagagagaagtgctgtgtgtagagtcctgttgtccaagcatgagaa
cacaagttcagatggccagcacctatgtaaaagcctggggagatggcagt
acctgtaaccccagggcgagggaccggaacatctgagggagtggaaagag
gtgggtcttaaggatcactgatctctgggttcagtgaaaaattctgcctc
aaaaactcatgtgaagagcaatagaggaaaacactagattttgatttctg
acctccacatgtgttcacacccacatacagtcatacatgaactcatacat
ataccacacacagacacacacactcaaacacacacgcacagagagagaga
aagagagagagagaaataatagaaaaaatattctcttggctgattctctt
agaacatatagagtccattctgaaaggagtttatgaaaatcactgttctg
taaacattgtcaggcgtctggctacagaaataacaaaacctaaagcactg
tgaaggcagcctcccttcctggtgatgtggccaggccaggtggagtaaca
ggccagacagtgtaacaggacttcagtgcaggctcttagcagtaagcttg
tggaagcttactagactttagttctgggcctgttattttctaccaaagga
ttttttttattttttagaaaacaagaaagtgtgtgtgtgtgtaggggggg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_12513523_12513975
seq2: B6Ng01-326P12.b_52_504

seq1  GAATTCATTCAAGGGAGCTCACAAGGACAGGGTCGCCAAAGACACTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAAGGGAGCTCACAAGGACAGGGTCGCCAAAGACACTAAGT  50

seq1  GTTTGCTTGTTTGTGTGTTTATTCCTTCAAGGTATCTTGTCTGTCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGTTTGTGTGTTTATTCCTTCAAGGTATCTTGTCTGTCTTGGG  100

seq1  CTGGTCCATCTCTGATCATTCTTCAAGCATCAGGCAGGACTTTTCAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCATCTCTGATCATTCTTCAAGCATCAGGCAGGACTTTTCAGGAG  150

seq1  TGCATATCTGGACTGCCGTGACTCGCCCTCAGGTTTGACAGAGATTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATCTGGACTGCCGTGACTCGCCCTCAGGTTTGACAGAGATTGGTT  200

seq1  TTATATGGGTTGAGTCTTTAGGGATATCTCTTTCCCATCTGCTCCCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGGTTGAGTCTTTAGGGATATCTCTTTCCCATCTGCTCCCTCAC  250

seq1  AGCTGTCCTTTCAGAGCTTTTGTGAGTAGACACCTGTGTTGGCAAAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCTTTCAGAGCTTTTGTGAGTAGACACCTGTGTTGGCAAAGGCC  300

seq1  AAGGCTTTTCTAATAAATATCGATTCCTTTCATCCTGTCTAACCTCATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTTCTAATAAATATCGATTCCTTTCATCCTGTCTAACCTCATAC  350

seq1  CCAGCTCAAGGAAGGGCTGACTGAACGGTTACCCAAGCCGTGGAAAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCAAGGAAGGGCTGACTGAACGGTTACCCAAGCCGTGGAAAGAGC  400

seq1  TCAGCCTCCTTCATCTCCTTCCCCTCCTCAAAGGGGGATGGGGGGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCCTTCATCTCCTTCCCCTCCTCAAAGGGGGATGGGGGGGGGAG  450

seq1  AAA  453
      |||
seq2  AAA  453

seq1: chr15_12690977_12691730
seq2: B6Ng01-326P12.g_71_825 (reverse)

seq1  CCCCCCCCCCCCTACACACACACACACTTTCTTGTTTTCTAAAAAAT-AA  49
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCCCCCCCCCCCTACACACACACACACTTTCTTGTTTTCTAAAAAATAAA  50

seq1  AAAAATCCTTTGGTAGAAAATAACAGGCCCAGAACTAAAGTCTAGTAAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTTTGGTAGAAAATAACAGGCCCAGAACTAAAGTCTAGTAAGC  100

seq1  TTCCACAAGCTTACTGCTAAGAGCCTGCACTGAAGTCCTGTTACACTGTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAGCTTACTGCTAAGAGCCTGCACTGAAGTCCTGTTACACTGTC  150

seq1  TGGCCTGTTACTCCACCTGGCCTGGCCACATCACCAGGAAGGGAGGCTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTTACTCCACCTGGCCTGGCCACATCACCAGGAAGGGAGGCTGC  200

seq1  CTTCACAGTGCTTTAGGTTTTGTTATTTCTGTAGCCAGACGCCTGACAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGTGCTTTAGGTTTTGTTATTTCTGTAGCCAGACGCCTGACAAT  250

seq1  GTTTACAGAACAGTGATTTTCATAAACTCCTTTCAGAATGGACTCTATAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGAACAGTGATTTTCATAAACTCCTTTCAGAATGGACTCTATAT  300

seq1  GTTCTAAGAGAATCAGCCAAGAGAATATTTTTTCTATTATTTCTCTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGAGAATCAGCCAAGAGAATATTTTTTCTATTATTTCTCTCTCT  350

seq1  CTCTTTCTCTCTCTCTGTGCGTGTGTGTTTGAGTGTGTGTGTCTGTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCTCTCTCTGTGCGTGTGTGTTTGAGTGTGTGTGTCTGTGTGT  400

seq1  GGTATATGTATGAGTTCATGTATGACTGTATGTGGGTGTGAACACATGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGTATGAGTTCATGTATGACTGTATGTGGGTGTGAACACATGTG  450

seq1  GAGGTCAGAAATCAAAATCTAGTGTTTTCCTCTATTGCTCTTCACATGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGAAATCAAAATCTAGTGTTTTCCTCTATTGCTCTTCACATGAG  500

seq1  TTTTTGAGGCAGAATTTTTCACTGAACCCAGAGATCAGTGATCCTTAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGGCAGAATTTTTCACTGAACCCAGAGATCAGTGATCCTTAAGA  550

seq1  CCCACCTCTTTCCACTCCCTCAGATGTTCCGGTCCCTCGCCCTGGGGTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCTTTCCACTCCCTCAGATGTTCCGGTCCCTCGCCCTGGGGTTA  600

seq1  CAGGTACTGCCATCTCCCCAGGCTTTTACATAGGTGCTGGCCATCTGAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACTGCCATCTCCCCAGGCTTTTACATAGGTGCTGGCCATCTGAAC  650

seq1  TTGTGTTCTCATGCTTGGACAACAGGACTCTACACACAGCACTTCTCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTCATGCTTGGACAACAGGACTCTACACACAGCACTTCTCTCT  700

seq1  AGCCCACTTACGCTCTTCCTATTAACTAAACACTCAAAGCTTTCCGAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACTTACGCTCTTCCTATTAACTAAACACTCAAAGCTTTCCGAAGG  750

seq1  AATTC  754
      |||||
seq2  AATTC  755