BAC Information

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BAC

Clone NameB6Ng01-332A02
Chromosome15 (Build37)
Map Location 18,047,140 - 18,048,264
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040162
Downstream geneLOC666835, LOC666839, Cdh10, EG666857
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332A02.bB6Ng01-332A02.g
ACCGA118229GA118230
length8441,140
definitionB6Ng01-332A02.b B6Ng01-332A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatatgcagcagttttaaactactgaggactgttttagcttttc
tggttttctgttattgttgtgttaaatgccttgttttgatttgtttcttt
atttccacatgaagctgaaaattgttctttaaatatttgtaaaaatgttg
atgtggatttcattgaatctgtagttggtatttgattgtatagcaaattt
acgatattaaccgtactgatccttgaggatagggtacctatccatcttct
aataccttcaatttccttcctcgatgtctagaaggttgttgttgttgatg
ttgctttttaaattataaagatctttcacttgctttgttagatttaccac
aagatattttatactttatatgttaaggctattgaaaaaagttgattgtt
ttagtgttttaattttgtgccatgctactttgctaacagtggttatcagc
tataagagttcctaggtagaatttgagactcacttctataagctgtcata
acatcttcaaataaagatattttgacttcatcccttaaaatttggatctc
ctttggttggtttcactgctagctaaagttcgaagaattgcactgagtgg
ttacagagagtatgaacaacattgtttcctactttagttgaaattgcttt
gaatttctttccatttaagtttatattggatatttccttgctgtaatatt
tctttattattttaagatatgtcctctgtatccttaaatactccaggaat
tttatgaagtgatgatttttttttctaaagaatttttttgcatctaaatg
aaatgatcatgttatattttgagggtatttttagttttattttt

gaattcctttctttctactcactaatgttatcctatcctgatgtatttct
tttggttttcttccatcatatttttattattataccttagaatcctcttt
gttctctaatgagggacagagaggggtagatccagatgagatgtcaggtg
ttaaggaactgtatacaatagaagaattgaaactgtaaacaggacttatt
gctttaaaaaatctatttgcaattgagggagaaaagaacagtagcagtga
taacattactaaataagtattttgcaatatattgtacgtataaaagtcaa
aagtatttagaagtgaaaagaaaaaggtcaactgcattttgaaatagtgt
agtttttgttttgttttgttttcctggtgataggggaacaaagaaatggt
aatgaacactttaaagaaaaggaaacgctattggaaaaagttggttcaga
attacaataaagtaaaatttctaaatatttgtggacataatattttttgg
acagcactaatatttaaatagaatagtaatgttatgagaattatattcat
gaccagatcagcacctaaaatatattaccaaattccccaaagaaaaagtg
tattacatagagtaattcctcctatcactgatacagttctttctcaagta
tgtaaattatttatcagtagttagtttctttccctttcactatagttgtt
aaagcaataaaatcataaaatgattatgcagcaaggattgttgccccaac
acattatttccattctgttacacaaaagtaaactggatattataagattt
caacagttttttaatttactctttctttcatactttatctcttaactcct
tccataatatttacagatatatgcacaaatgaataattatgaatatatcc
aaatgacattttgttactcttaattacacagtcatgtaagtacatgaagt
caaatatatattagcatatttatactgtattcaaatttatctgtgatggg
acatagtatgctgcccaatgactaaggaaaataaggcaataaaatatttt
ttttatttaatgggtcttattgggttgggttggtaagagaaagttcccag
gtggtggggattgttgcaatggaacaacagaagcctagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18047140_18048264
seq2: B6Ng01-332A02.g_66_1205 (reverse)

seq1  TCCTAGGCTTCTG-TGGTCCA-TGCAAACATCCACA----CATGGAAC-T  43
      ||||||||||||| || |||| |||||  |||| ||    |  ||||| |
seq2  TCCTAGGCTTCTGTTGTTCCATTGCAACAATCCCCACCACCTGGGAACTT  50

seq1  TCTCTTACCAAACCAA-CCAAT-AGA-CCAATAAATAAAAAATA---TCT  87
      ||||||||||| |||| ||||| ||| ||| ||||||||||| |   | |
seq2  TCTCTTACCAACCCAACCCAATAAGACCCATTAAATAAAAAAAATATTTT  100

seq1  ATTG-CTTATTATCCTTAGTCATTGGGCAGCATACTATGT-CCATCACAG  135
      |||| |||||| |||||||||||||||||||||||||||| |||||||||
seq2  ATTGCCTTATTTTCCTTAGTCATTGGGCAGCATACTATGTCCCATCACAG  150

seq1  ATAAA-TTGAATACAGTATAAAATATGCTAATATATATTTGACTTCATGT  184
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATAAATTTGAATACAGTAT-AAATATGCTAATATATATTTGACTTCATGT  199

seq1  ACTTACATGACTGTGTAATTAAGAGTAACAAAATGTCATTTGGATATATT  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATGACTGTGTAATTAAGAGTAACAAAATGTCATTTGGATATATT  249

seq1  CATAATTATTCATTTGTGCATATATCTGTAAATATTATGGAAGGAGTTAA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTATTCATTTGTGCATATATCTGTAAATATTATGGAAGGAGTTAA  299

seq1  GAGATAAAGTATGAAAGAAAGAGTAAATTAAAAAACTGTTGAAATCTTAT  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGTATGAAAGAAAGAGTAAATTAAAAAACTGTTGAAATCTTAT  349

seq1  AATATCCAGTTTACTTTTGTGTAACAGAATGGAAATAATGTGTTGGGGCA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAGTTTACTTTTGTGTAACAGAATGGAAATAATGTGTTGGGGCA  399

seq1  ACAATCCTTGCTGCATAATCATTTTATGATTTTATTGCTTTAACAACTAT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTTGCTGCATAATCATTTTATGATTTTATTGCTTTAACAACTAT  449

seq1  AGTGAAAGGGAAAGAAACTAACTACTGATAAATAATTTACATACTTGAGA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGGGAAAGAAACTAACTACTGATAAATAATTTACATACTTGAGA  499

seq1  AAGAACTGTATCAGTGATAGGAGGAATTACTCTATGTAATACACTTTTTC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGTATCAGTGATAGGAGGAATTACTCTATGTAATACACTTTTTC  549

seq1  TTTGGGGAATTTGGTAATATATTTTAGGTGCTGATCTGGTCATGAATATA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAATTTGGTAATATATTTTAGGTGCTGATCTGGTCATGAATATA  599

seq1  ATTCTCATAACATTACTATTCTATTTAAATATTAGTGCTGTCCAAAAAAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATAACATTACTATTCTATTTAAATATTAGTGCTGTCCAAAAAAT  649

seq1  ATTATGTCCACAAATATTTAGAAATTTTACTTTATTGTAATTCTGAACCA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCCACAAATATTTAGAAATTTTACTTTATTGTAATTCTGAACCA  699

seq1  ACTTTTTCCAATAGCGTTTCCTTTTCTTTAAAGTGTTCATTACCATTTCT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCCAATAGCGTTTCCTTTTCTTTAAAGTGTTCATTACCATTTCT  749

seq1  TTGTTCCCCTATCACCAGGAAAACAAAACAAAACAAAAACTACACTATTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCCCTATCACCAGGAAAACAAAACAAAACAAAAACTACACTATTT  799

seq1  CAAAATGCAGTTGACCTTTTTCTTTTCACTTCTAAATACTTTTGACTTTT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGCAGTTGACCTTTTTCTTTTCACTTCTAAATACTTTTGACTTTT  849

seq1  ATACGTACAATATATTGCAAAATACTTATTTAGTAATGTTATCACTGCTA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTACAATATATTGCAAAATACTTATTTAGTAATGTTATCACTGCTA  899

seq1  CTGTTCTTTTCTCCCTCAATTGCAAATAGATTTTTTAAAGCAATAAGTCC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTTTCTCCCTCAATTGCAAATAGATTTTTTAAAGCAATAAGTCC  949

seq1  TGTTTACAGTTTCAATTCTTCTATTGTATACAGTTCCTTAACACCTGACA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGTTTCAATTCTTCTATTGTATACAGTTCCTTAACACCTGACA  999

seq1  TCTCATCTGGATCTACCCCTCTCTGTCCCTCATTAGAGAACAAAGAGGAT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTGGATCTACCCCTCTCTGTCCCTCATTAGAGAACAAAGAGGAT  1049

seq1  TCTAAGGTATAATAATAAAAATATGATGGAAGAAAACCAAAAGAAATACA  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTATAATAATAAAAATATGATGGAAGAAAACCAAAAGAAATACA  1099

seq1  TCAGGATAGGATAACATTAGTGAGTAGAAAGAAAGGAATTC  1125
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATAGGATAACATTAGTGAGTAGAAAGAAAGGAATTC  1140


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