BAC Information

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BAC

Clone NameB6Ng01-332A20
Chromosome15 (Build37)
Map Location 22,986,807 - 23,120,280
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332A20.bB6Ng01-332A20.g
ACCGA118264GA118265
length524885
definitionB6Ng01-332A20.b B6Ng01-332A20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,986,807 - 22,987,336)(23,119,400 - 23,120,280)
sequence
tctcaaaatacatcatcttggttcttttatgaaccaacaacatttccact
caattagtattttttctcatttgtttgaaagtcccagtggattagtaaag
cttgcattatcataatatagtacgaaacgctatatagcatcaccaggtaa
gttttcatttactttgcatatggtacaatagatcttttatgattatagtg
ggtttagaaaacacataaagcatataatgaagctatgaaaacctctcaat
accaatacaatccctataaacactggggaataatactgtaaatacatata
gtaaatttattgacatcattttgcattttagaaaaatgtctgttttaatt
tcatttgttccacatataaggtgcatcaatgaatattctaattctcttag
atatattaaacagaaagcaatttgatatctttgtccttatagcatgcata
tgtttgtgaggtatatttattgagtgaaattatttcctcctttgtcttcc
tgtgtgtgtgtgtgtgtgtgtgtg

gaattctcttccaaggtttactatctaagttgcttctcttggagtggggt
ggagatagtgtttgtcacagagccttctatgaccttatttctcaactatg
aatctgcagtcatcaacaccattttacgaggagcttagttgccctttaca
gtcagcagggacatgggacatgaacttccacatggcttttgttctctatc
aataaaaatgttcttttgagttcaaagatttatcctttatctttaatagt
aactgttaaaaaaatagtcttaccaatcaccgttctactatacctttata
tttgtccataacaaattctgttcattaaagtaataatatcctacctctta
agcactagagaaatcaaggatgcttgcctacaattctactttagtcattt
cccaactataatagatagatgattatgtattataaataggtctgagggtg
tcaaattatagagcatatagttcatagaacatcatccttataaatttact
tatcaatgaaatgtccttattaaacatgacctagagcatttaatactaaa
tatccctggatcaaaatgaataaagtaaactaaatgtgagtttctatcaa
aaatgtcagcctttaatagctagaggcagtagatctaagacttgatggcc
ttactcaacataataggaagcgtgaagacagtctgcatgagactgcctta
aacaaaaaatataaaattggttaaaagtttgattagacattcagggaaga
tatgatcactggctaaataagcatttactttattgtgtttttatttgata
tggggggcgggggggagtgactgcaaggcatcaaaactggttggaaaaca
ttaccacaagagacaaagaatgaaactagaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22986807_22987336
seq2: B6Ng01-332A20.b_48_577

seq1  GAATTCTCTCAAAATACATCATCTTGGTTCTTTTATGAACCAACAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAAATACATCATCTTGGTTCTTTTATGAACCAACAACATT  50

seq1  TCCACTCAATTAGTATTTTTTCTCATTTGTTTGAAAGTCCCAGTGGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCAATTAGTATTTTTTCTCATTTGTTTGAAAGTCCCAGTGGATTA  100

seq1  GTAAAGCTTGCATTATCATAATATAGTACGAAACGCTATATAGCATCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTTGCATTATCATAATATAGTACGAAACGCTATATAGCATCACC  150

seq1  AGGTAAGTTTTCATTTACTTTGCATATGGTACAATAGATCTTTTATGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGTTTTCATTTACTTTGCATATGGTACAATAGATCTTTTATGATT  200

seq1  ATAGTGGGTTTAGAAAACACATAAAGCATATAATGAAGCTATGAAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGGTTTAGAAAACACATAAAGCATATAATGAAGCTATGAAAACCT  250

seq1  CTCAATACCAATACAATCCCTATAAACACTGGGGAATAATACTGTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATACCAATACAATCCCTATAAACACTGGGGAATAATACTGTAAATA  300

seq1  CATATAGTAAATTTATTGACATCATTTTGCATTTTAGAAAAATGTCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGTAAATTTATTGACATCATTTTGCATTTTAGAAAAATGTCTGTT  350

seq1  TTAATTTCATTTGTTCCACATATAAGGTGCATCAATGAATATTCTAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCATTTGTTCCACATATAAGGTGCATCAATGAATATTCTAATTC  400

seq1  TCTTAGATATATTAAACAGAAAGCAATTTGATATCTTTGTCCTTATAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATATATTAAACAGAAAGCAATTTGATATCTTTGTCCTTATAGCA  450

seq1  TGCATATGTTTGTGAGGTATATTTATTGAGTGAAATTATTTCCTCCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGTTTGTGAGGTATATTTATTGAGTGAAATTATTTCCTCCTTTG  500

seq1  TCTTCCTGTGTGTGTGTGTGTGTGTGTGTG  530
      ||||||||||||||||||||||||||||||
seq2  TCTTCCTGTGTGTGTGTGTGTGTGTGTGTG  530


seq1: chr15_23119400_23120280
seq2: B6Ng01-332A20.g_64_948 (reverse)

seq1  AATTTTCTAGTTTCCTTCTTTGTCTCTTGT-GTTATGTTTTCCTGCCAGT  49
      |||||||||||||| ||||||||||||||| || |||||||||  |||||
seq2  AATTTTCTAGTTTCATTCTTTGTCTCTTGTGGTAATGTTTTCCAACCAGT  50

seq1  TGTGATG-CTTGCAGTCACT-CCCCCCGCCCCCCATATCAAATAAAAACA  97
      | ||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  TTTGATGCCTTGCAGTCACTCCCCCCCGCCCCCCATATCAAATAAAAACA  100

seq1  CAAT-AAGTAAATGCTTATTTAGCCAGTGATCATATCTTCCCTGAATGTC  146
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTAAATGCTTATTTAGCCAGTGATCATATCTTCCCTGAATGTC  150

seq1  TAATCAAACTTTTAACCAATTTTATATTTTTTGTTTAAGGCAGTCTCATG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAACTTTTAACCAATTTTATATTTTTTGTTTAAGGCAGTCTCATG  200

seq1  CAGACTGTCTTCACGCTTCCTATTATGTTGAGTAAGGCCATCAAGTCTTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTCTTCACGCTTCCTATTATGTTGAGTAAGGCCATCAAGTCTTA  250

seq1  GATCTACTGCCTCTAGCTATTAAAGGCTGACATTTTTGATAGAAACTCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTGCCTCTAGCTATTAAAGGCTGACATTTTTGATAGAAACTCAC  300

seq1  ATTTAGTTTACTTTATTCATTTTGATCCAGGGATATTTAGTATTAAATGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTTACTTTATTCATTTTGATCCAGGGATATTTAGTATTAAATGC  350

seq1  TCTAGGTCATGTTTAATAAGGACATTTCATTGATAAGTAAATTTATAAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTCATGTTTAATAAGGACATTTCATTGATAAGTAAATTTATAAGG  400

seq1  ATGATGTTCTATGAACTATATGCTCTATAATTTGACACCCTCAGACCTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTCTATGAACTATATGCTCTATAATTTGACACCCTCAGACCTAT  450

seq1  TTATAATACATAATCATCTATCTATTATAGTTGGGAAATGACTAAAGTAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATACATAATCATCTATCTATTATAGTTGGGAAATGACTAAAGTAG  500

seq1  AATTGTAGGCAAGCATCCTTGATTTCTCTAGTGCTTAAGAGGTAGGATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGGCAAGCATCCTTGATTTCTCTAGTGCTTAAGAGGTAGGATAT  550

seq1  TATTACTTTAATGAACAGAATTTGTTATGGACAAATATAAAGGTATAGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTTAATGAACAGAATTTGTTATGGACAAATATAAAGGTATAGTA  600

seq1  GAACGGTGATTGGTAAGACTATTTTTTTAACAGTTACTATTAAAGATAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGTGATTGGTAAGACTATTTTTTTAACAGTTACTATTAAAGATAAA  650

seq1  GGATAAATCTTTGAACTCAAAAGAACATTTTTATTGATAGAGAACAAAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAATCTTTGAACTCAAAAGAACATTTTTATTGATAGAGAACAAAAG  700

seq1  CCATGTGGAAGTTCATGTCCCATGTCCCTGCTGACTGTAAAGGGCAACTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGAAGTTCATGTCCCATGTCCCTGCTGACTGTAAAGGGCAACTA  750

seq1  AGCTCCTCGTAAAATGGTGTTGATGACTGCAGATTCATAGTTGAGAAATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCGTAAAATGGTGTTGATGACTGCAGATTCATAGTTGAGAAATA  800

seq1  AGGTCATAGAAGGCTCTGTGACAAACACTATCTCCACCCCACTCCAAGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATAGAAGGCTCTGTGACAAACACTATCTCCACCCCACTCCAAGAG  850

seq1  AAGCAACTTAGATAGTAAACCTTGGAAGAGAATTC  881
      |||||||||||||||||||||||||||||||||||
seq2  AAGCAACTTAGATAGTAAACCTTGGAAGAGAATTC  885


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