BAC Information

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BAC

Clone NameB6Ng01-332O19
Chromosome15 (Build37)
Map Location 70,532,598 - 70,655,164
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332O19.bB6Ng01-332O19.g
ACCGA118886GA118887
length1,1561,012
definitionB6Ng01-332O19.b B6Ng01-332O19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,532,598 - 70,533,757)(70,654,151 - 70,655,164)
sequence
gaattctgttctgctaaatgctcttttcattgctttatcaaggaacaatg
ggttctaccagatttcagcactgggactaataactcctaactgcctatga
ggtgcaatattgtattcaattctatttgtgccccagttacctatctgtgt
atactgtaactacccccctattattgaggaatcattatgtgtgcaatctg
ttttaataatattttttgtagtaagattattatttctcaccacaaccatt
tgaagctggatcttcattgtgtttacttctctatagcatttacaactaag
tgttcaccatttgaatgaaacctaggtcagattattattcaaactggttc
ttctggtagcagcatggactccgtatcattctgttgctgaggaatagaat
gcctcaaaattctcaccagtgcagatattgaaactgacctagatccttag
ataagtcaagagaaattaacctagttaaggagatgccagtccagtactac
tgagcagagtatcatgcctttttatccagatattctataactttaatgat
ttgatctcctgtacatagtcagtaatcataaacacacgttaatcttttct
tgaatactgcattcatgacaactttgaaggaatatgatcatttttcatgt
agaaatatgttcaaactatcaagcaacaaaaattaatagaagagaccttg
aatataaaaaaaaggaaagggattgtttagaaatggaaggaggaatggat
atcttacaatgataagctccaaaatcaaaatcaaaaggagtaacaaaaag
ataaagtaaaataaaaacctaccacatttcatctcaccattatcatggtt
taacaaaaagtgccaaattttactaggaccatgttgaaaattccctatgc
ataactctttgcctgtaaataatgagtgtatgaatgtgctctatttctta
gaagataacaattctaaactgtatttcttcctccaataatatatgtggtt
ttgatcaagctatttcatttccccatggctgtgtgtttcatgcttaattt
gaacatagcattacctgccctttttagtgttgtgactatcaaggtctttt
caaagttggggctggcccagaagtggcagaaagcactgattgaggaagta
aatcct

gaattcctaaatggtatcttcaaacagataagtaatctgacctaaaactt
aaggtaaccagggagtgttgcactagataatgcagggaaaatagtttcct
aggaatgataaatgcacacttagtagagcaacatactactagaagttcaa
catggggttatctgagctgcctggactctgtagatgtttataaatatgaa
ttaaatatatgttgccttagaggatgaatatgacttatatgggtgagcta
ctgaatgtatgatcttgagcacttaaatttctcttaaaattcagctgttt
cttggaggattgagaagactgtgagagtgtgtatgcggtgagtttagtga
atgaatacatgtggatgtcccacacaaaggtggatggatgccaaacaaga
ccttttttcactcaccaatcataccatgacattataattattattattat
tattattattattattattattattattattattattattattttacctg
ttaatactattgtattggagttgtttggatcagctacagtcatctgtctg
agccatcagcacactggcaaaaagttctgctgtgtgcgacccttccttag
tgttcaaaatcagtgagtaacttttcacggctttctgtttgttggcttag
ttggtttcatttatttctctacactccgatgtaggagttgactactctga
cttgctgtggaaattcaggcctgtaggaacacattttctttgggaaatgc
tcctgagggccagtgaaggaacctttgggatgttcttagacactgtttca
gtggctttatgcctcttcaatgacaagatttctcctagagatggattgag
aactctgttggtataatgatcatgcccattggccttgaggccaattccct
aaagtgtctagtcaaagccccacctgagcaatgaaacgtatgttcctcct
cttcaagcattacagacctagctttgtcctaatatttttctccttccttc
cttcctttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70532598_70533757
seq2: B6Ng01-332O19.b_46_1201

seq1  GAATTCTGTTCTGCTAAATGCTCTTTTCATTGCTTTATCAAGGAACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGCTAAATGCTCTTTTCATTGCTTTATCAAGGAACAATG  50

seq1  GGTTCTACCAGATTTCAGCACTGGGACTAATAACTCCTAACTGCCTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTACCAGATTTCAGCACTGGGACTAATAACTCCTAACTGCCTATGA  100

seq1  GGTGCAATATTGTATTCAATTCTATTTGTGCCCCAGTTACCTATCTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAATATTGTATTCAATTCTATTTGTGCCCCAGTTACCTATCTGTGT  150

seq1  ATACTGTAACTACCCCCCTATTATTGAGGAATCATTATGTGTGCAATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTAACTACCCCCCTATTATTGAGGAATCATTATGTGTGCAATCTG  200

seq1  TTTTAATAATATTTTTTGTAGTAAGATTATTATTTCTCACCACAACCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATATTTTTTGTAGTAAGATTATTATTTCTCACCACAACCATT  250

seq1  TGAAGCTGGATCTTCATTGTGTTTACTTCTCTATAGCATTTACAACTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTGGATCTTCATTGTGTTTACTTCTCTATAGCATTTACAACTAAG  300

seq1  TGTTCACCATTTGAATGAAACCTAGGTCAGATTATTATTCAAACTGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACCATTTGAATGAAACCTAGGTCAGATTATTATTCAAACTGGTTC  350

seq1  TTCTGGTAGCAGCATGGACTCCGTATCATTCTGTTGCTGAGGAATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAGCAGCATGGACTCCGTATCATTCTGTTGCTGAGGAATAGAAT  400

seq1  GCCTCAAAATTCTCACCAGTGCAGATATTGAAACTGACCTAGATCCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAAATTCTCACCAGTGCAGATATTGAAACTGACCTAGATCCTTAG  450

seq1  ATAAGTCAAGAGAAATTAACCTAGTTAAGGAGATGCCAGTCCAGTACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCAAGAGAAATTAACCTAGTTAAGGAGATGCCAGTCCAGTACTAC  500

seq1  TGAGCAGAGTATCATGCCTTTTTATCCAGATATTCTATAACTTTAATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGAGTATCATGCCTTTTTATCCAGATATTCTATAACTTTAATGAT  550

seq1  TTGATCTCCTGTACATAGTCAGTAATCATAAACACACGTTAATCTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTCCTGTACATAGTCAGTAATCATAAACACACGTTAATCTTTTCT  600

seq1  TGAATACTGCATTCATGACAACTTTGAAGGAATATGATCATTTTTCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACTGCATTCATGACAACTTTGAAGGAATATGATCATTTTTCATGT  650

seq1  AGAAATATGTTCAAACTATCAAGCAACAAAAATTAATAGAAGAGACCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATGTTCAAACTATCAAGCAACAAAAATTAATAGAAGAGACCTTG  700

seq1  AATATAAAAAAAAGGAAAGGGATTGTTTAGAAATGGAAGGAGGAATGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAAAAAAGGAAAGGGATTGTTTAGAAATGGAAGGAGGAATGGAT  750

seq1  ATCTTACAATGATAAGCTCCAAAATCAAAATCAAAAGGAGTAACAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAATGATAAGCTCCAAAATCAAAATCAAAAGGAGTAACAAAAAG  800

seq1  ATAAAGTAAAATAAAAACCTACCACATTTCATCTCACCATTATCATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTAAAATAAAAACCTACCACATTTCATCTCACCATTATCATGGTT  850

seq1  TAACAAAAAGTGCCAAATTTTACTAGGACCATGTTGAAAATTCCCTATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAAGTGCCAAATTTTACTAGGACCATGTTGAAAATTCCCTATGC  900

seq1  ATAACTCTTTGCCTGTAAATAATGAGTGTATGAATGTGCTCTATTTCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCTTTGCCTGTAAATAATGAGTGTATGAATGTGCTCTATTTCTTA  950

seq1  GAAGATAACAATTCTAAACTGTATTTCTTCCTCCAATAATATATGTGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAACAATTCTAAACTGTATTTCTTCCTCCAATAATATATGTGGTT  1000

seq1  TTGATCAAGCTATTTCATTTCCCCATGGCTGTGTGTTTCATGCTTAATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAAGCTATTTCATTTCCCCATGGCTGTGTGTTTCATGCTTAATTT  1050

seq1  GAACATAGCATTACCTGCCCTTTTTAGTG-TGTGACTAATTCAGGGTCTT  1099
      ||||||||||||||||||||||||||||| ||||||||  ||| ||||||
seq2  GAACATAGCATTACCTGCCCTTTTTAGTGTTGTGACTA--TCAAGGTCTT  1098

seq1  TTCAAAGTTGGGGCTGGGTCAAGAAGGTGGCAGAAAGCAGCTGATTTGAG  1149
      ||||||||||||||| || | |||| ||||||||||||| |||| |||||
seq2  TTCAAAGTTGGGGCT-GGCCCAGAA-GTGGCAGAAAGCA-CTGA-TTGAG  1144

seq1  GAAGT-AATCCT  1160
      ||||| ||||||
seq2  GAAGTAAATCCT  1156


seq1: chr15_70654151_70655164
seq2: B6Ng01-332O19.g_66_1077 (reverse)

seq1  AAGG-AAGGAAGGAAGGAAGGAAGAAAATATTAGGACAAAGCTAGGTCTG  49
      |||| |||||||||||||||||  ||||||||||||||||||||||||||
seq2  AAGGAAAGGAAGGAAGGAAGGAGAAAAATATTAGGACAAAGCTAGGTCTG  50

seq1  TAATGCTTGAAGAGGAGGAACATACGTTTCATTGCTCAGGTGGGGCTTTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTGAAGAGGAGGAACATACGTTTCATTGCTCAGGTGGGGCTTTG  100

seq1  ACTAGACACTTTAGGGAATTGGCCTCAAGGCCAATGGGCATGATCATTAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACACTTTAGGGAATTGGCCTCAAGGCCAATGGGCATGATCATTAT  150

seq1  ACCAACAGAGTTCTCAATCCATCTCTAGGAGAAATCTTGTCATTGAAGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGAGTTCTCAATCCATCTCTAGGAGAAATCTTGTCATTGAAGAG  200

seq1  GCATAAAGCCACTGAAACAGTGTCTAAGAACATCCCAAAGGTTCCTTCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAGCCACTGAAACAGTGTCTAAGAACATCCCAAAGGTTCCTTCAC  250

seq1  TGGCCCTCAGGAGCATTTCCCAAAGAAAATGTGTTCCTACAGGCCTGAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTCAGGAGCATTTCCCAAAGAAAATGTGTTCCTACAGGCCTGAAT  300

seq1  TTCCACAGCAAGTCAGAGTAGTCAACTCCTACATCGGAGTGTAGAGAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGCAAGTCAGAGTAGTCAACTCCTACATCGGAGTGTAGAGAAAT  350

seq1  AAATGAAACCAACTAAGCCAACAAACAGAAAGCCGTGAAAAGTTACTCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAACCAACTAAGCCAACAAACAGAAAGCCGTGAAAAGTTACTCAC  400

seq1  TGATTTTGAACACTAAGGAAGGGTCGCACACAGCAGAACTTTTTGCCAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGAACACTAAGGAAGGGTCGCACACAGCAGAACTTTTTGCCAGT  450

seq1  GTGCTGATGGCTCAGACAGATGACTGTAGCTGATCCAAACAACTCCAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGATGGCTCAGACAGATGACTGTAGCTGATCCAAACAACTCCAATA  500

seq1  CAATAGTATTAACAGGTAAAATAATAATAATAATAATAATAATAATAATA  549
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  CAATAGTATTAACAGGTAA---AATAATAATAATAATAATAATAATAATA  547

seq1  ATAATAATAATAATAATAATAATAATAATTATAATGTCATGGTATGATTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAATAATAATAATTATAATGTCATGGTATGATTG  597

seq1  GTGAGTGAAAAAAGGTCTTGTTTGGCATCCATCCACCTTTGTGTGGGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGAAAAAAGGTCTTGTTTGGCATCCATCCACCTTTGTGTGGGACA  647

seq1  TCCACATGTATTCATTCACTAAACTCACCGCATACACACTCTCACAGTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGTATTCATTCACTAAACTCACCGCATACACACTCTCACAGTCT  697

seq1  TCTCAATCCTCCAAGAAACAGCTGAATTTTAAGAGAAATTTAAGTGCTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATCCTCCAAGAAACAGCTGAATTTTAAGAGAAATTTAAGTGCTCA  747

seq1  AGATCATACATTCAGTAGCTCACCCATATAAGTCATATTCATCCTCTAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATACATTCAGTAGCTCACCCATATAAGTCATATTCATCCTCTAAG  797

seq1  GCAACATATATTTAATTCATATTTATAAACATCTACAGAGTCCAGGCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATATATTTAATTCATATTTATAAACATCTACAGAGTCCAGGCAGC  847

seq1  TCAGATAACCCCATGTTGAACTTCTAGTAGTATGTTGCTCTACTAAGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAACCCCATGTTGAACTTCTAGTAGTATGTTGCTCTACTAAGTGT  897

seq1  GCATTTATCATTCCTAGGAAACTATTTTCCCTGCATTATCTAGTGCAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATCATTCCTAGGAAACTATTTTCCCTGCATTATCTAGTGCAACA  947

seq1  CTCCCTGGTTACCTTAAGTTTTAGGTCAGATTACTTATCTGTTTGAAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGTTACCTTAAGTTTTAGGTCAGATTACTTATCTGTTTGAAGAT  997

seq1  ACCATTTAGGAATTC  1014
      |||||||||||||||
seq2  ACCATTTAGGAATTC  1012


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