BAC Information

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BAC

Clone NameB6Ng01-334N21
Chromosome15 (Build37)15 (Build37)
Map Location 56,284,866 - 56,285,10096,565,271 - 96,566,339
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
Downstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984, BC026439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334N21.bB6Ng01-334N21.g
ACCGA120265GA120266
length9691,075
definitionB6Ng01-334N21.b B6Ng01-334N21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(56,284,866 - 56,285,100)(96,565,271 - 96,566,339)
sequence
gaattctatacagcctcagtcaaactctcagaagctgttctgcgagtata
gacaaaccaattttaaagtttagggagagatcataaagagccaataccac
attgaaggagacaaagagtcaggaaactaatactgtgttgcttcaaggtt
aattataaaagctacaaatccaatgcaacattgtatccacagaacaggca
agttgatgaaagagatacaatacagtcaactggtctgtattggaggagta
aaggtggtctaaatactggtagaccacaacccaagccaaaactataaagg
tagacacagaacatgacttcagaacacgggctcacagtagatcttagatc
tgaatgtgagacataaagctgtgagactttagaaagagaagaatctacat
ggccctctgtttggatgtgagtttttaatgtaacattggttatatatacc
ccaacactaaaagcacatacgtgaaaaagatcagctggacgtcattaaaa
ttaaatgtttctggtcggcaaaagacactgccaaaggaaatggaaagata
atccacagtgtagatgaaaacgtatgaataagctaaataaattaaataaa
ctacccaaccaactagcaaaaaccatcaaacttcaaaacacacctcatca
aagagacacggttgacaaatatttacatgaaaggtgtcattattgacatc
tagccttagtctctggtgatctgataggatgcatgagattatttcaatct
tcttgtatctgttgaggcttgttttgttatggtcaattttggagaaaata
ccatagtaccacaagatgctgagaagaagaaggtgtattcttttagtttg
ttttatggtgaaatgtttacacacacacacacacacacacaacacacaca
cacattccattttgggttcataaccttttatagtttcactgtgtctctgt
taagtttctgttcaatgac
gaattcaaagctaagactggagcaaagtacagttcaaatagtcacaattt
agcattcgatacacacacacacacacacacacacacacacacacacacac
acacctacaaacacacacacacacagtatacatatgacagggtgtcatgt
agcccaggcttgtctaagtactggaatatcgggtattaggctaccacaaa
gctttcatcttatattaattaatgaaatccatcagaaatgtgttaaaaca
gtttgttttctctgaactttttttgttttttttttttttttttgtttgtt
tgtttgtttttttcgagacagggtttctctgtgtagccctggctgtcctg
gaactcactttgtagaccaggctggcctcgaactcagaaatccgcctgcc
cctgcctcccgagtgctgggattaaaggcgtgcgccaccatgcccggctt
ctctgaactcttaggaccacacacacacacgggagaccgcaatcctcgga
aatttattctaatggtcaaacatttgattttagatttgttaacttgtcct
caaagatatcaccagatgttagtttagacttgcccatggatgtgttgcta
atttgtgcttcttagcagctggtgagggagaaacagtagtgacagcagta
aggtagtgacaatggtggggtctggtggtggtagacttctgtggtcctag
cagcagggagcaggagcagggagaactggagtcttaacttgggctacaca
ttaagaccttttctcaaaaaaaaaaaaaaaagaaagaaagaaaagaaaaa
agaaagaaaggaaacgaaaagaaaagggacaatgaaaccacccagcaaag
cctttcagtcgctgttagtccgcagtcgtttaaccgttaacctgccaatc
ctggttgtagcaggtgctgtcacgggtagtgcaaagggtcaaggttcggc
tatagtcccctagaatttcaattttcttcatctcgaaaggaggaacctta
ttgtcaatttactttttattatgtgccttagtggcccttttgctgaagat
tacacaatcagtggcgtgcccacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56284866_56285100
seq2: B6Ng01-334N21.b_677_953

seq1  AACTTCAAAACACACCATTTGTTAAAAAGTAGCAAGTTCATGTAGTAAAA  50
      ||||||||||||||||  |  | ||| ||   || | |    |   ||| 
seq2  AACTTCAAAACACACC--TCATCAAAGAG--ACACGGT----TGACAAAT  42

seq1  ATTTA----GGAGGTGGCAAAA---------AGGCTT------------T  75
      |||||      ||||| ||  |         || |||            |
seq2  ATTTACATGAAAGGTGTCATTATTGACATCTAGCCTTAGTCTCTGGTGAT  92

seq1  GTAATAAGCAGCA----GCCATTTCCCCCTCCAT---TTGGTTAAAG---  115
       | ||| |  |||       |||||   || | |   |  ||| | |   
seq2  CTGATAGGATGCATGAGATTATTTCAATCTTCTTGTATCTGTTGAGGCTT  142

seq1  ---ATGCCATGGTTACTCT------CCCTGCTCTAGCTACCTAAAACTGT  156
          ||  ||||| | | |         | |  ||| ||||  ||  || 
seq2  GTTTTGTTATGGTCAATTTTGGAGAAAATACCATAG-TACCACAAGATG-  190

seq1  TCTGGGCAGATAGAAGAGACA------CAG---GAATCA--CACACATAC  195
       ||| | ||| |||||    |       ||   |  | |     | ||  
seq2  -CTGAGAAGA-AGAAGGTGTATTCTTTTAGTTTGTTTTATGGTGAAATGT  238

seq1  ATACACACACACACACACACACACACACACACACACACAT  235
       |||||||||||||||||||||||| ||||||||||||||
seq2  TTACACACACACACACACACACACA-ACACACACACACAT  277

seq1: chr15_96565271_96566339
seq2: B6Ng01-334N21.g_69_1143

seq1  GAATTCAAAGCTAAGACTGGAGCAAAGTACAGTTCAAATAGTCACAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTAAGACTGGAGCAAAGTACAGTTCAAATAGTCACAATTT  50

seq1  AGCATTCGATACACACACACACACACACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCGATACACACACACACACACACACACACACACACACACACACAC  100

seq1  ACACCTACAAACACACACACACACAGTATACATATGACAGGGTGTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTACAAACACACACACACACAGTATACATATGACAGGGTGTCATGT  150

seq1  AGCCCAGGCTTGTCTAAGTACTGGAATATCGGGTATTAGGCTACCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGCTTGTCTAAGTACTGGAATATCGGGTATTAGGCTACCACAAA  200

seq1  GCTTTCATCTTATATTAATTAATGAAATCCATCAGAAATGTGTTAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATCTTATATTAATTAATGAAATCCATCAGAAATGTGTTAAAACA  250

seq1  GTTTGTTTTCTCTGAACTTTTTTTGTTTTTTTTTTTTTTTTTTGTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTCTCTGAACTTTTTTTGTTTTTTTTTTTTTTTTTTGTTTGTT  300

seq1  TGTTTGTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTG  350

seq1  GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCC  400

seq1  CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCATGCCCGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCATGCCCGGCTT  450

seq1  CTCTGAACTCTTAGGACCACACACACACACGGGAGACCGCAATCCTCGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACTCTTAGGACCACACACACACACGGGAGACCGCAATCCTCGGA  500

seq1  AATTTATTCTAATGGTCAAACATTTGATTTTAGATTTGTTAACTTGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCTAATGGTCAAACATTTGATTTTAGATTTGTTAACTTGTCCT  550

seq1  CAAAGATATCACCAGATGTTAGTTTAGACTTGCCCATGGATGTGTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATATCACCAGATGTTAGTTTAGACTTGCCCATGGATGTGTTGCTA  600

seq1  ATTTGTGCTTCTTAGCAGCTGGTGAGGGAGAAACAGTAGTGACAGCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGCTTCTTAGCAGCTGGTGAGGGAGAAACAGTAGTGACAGCAGTA  650

seq1  AGGTAGTGACAATGGTGGGGTCTGGTGGTGGTAGACTTCTGTGGTCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTGACAATGGTGGGGTCTGGTGGTGGTAGACTTCTGTGGTCCTAG  700

seq1  CAGCAGGGAGCAGGAGCAGGGAGAACTGGAGTCTTAACTTGGGCTACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGAGCAGGAGCAGGGAGAACTGGAGTCTTAACTTGGGCTACACA  750

seq1  TTAAGACCTTTTCTCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAA  800
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  TTAAGACCTTTTCTC-AAAAAAAAAAAAAAAAGAAAGAAAG-AAAAGAAA  798

seq1  AAAGAAAAGAAAGGAAACGAAAAGAAAAAGGACAATGAAACCA-CCAGCA  849
      |||| ||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AAAG-AAAGAAAGGAAACGAAAAGAAAAGGGACAATGAAACCACCCAGCA  847

seq1  AAGCCTTTCAGTCGCTGTTAGTCCGCAGTCG-TTAACCGTTAACCTGCCA  898
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGCCTTTCAGTCGCTGTTAGTCCGCAGTCGTTTAACCGTTAACCTGCCA  897

seq1  ATCCTGG-TGTAGCAGGTGCTGTCAC-GGTAGTGCAAAGGGTCAAGGTTC  946
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  ATCCTGGTTGTAGCAGGTGCTGTCACGGGTAGTGCAAAGGGTCAAGGTTC  947

seq1  GGCATAAGTCCCCTAGAATTCCAA-TTTCTTCATCTCGAAAGGAGGAACC  995
      |||   |||||||||||||| ||| |||||||||||||||||||||||||
seq2  GGCTATAGTCCCCTAGAATTTCAATTTTCTTCATCTCGAAAGGAGGAACC  997

seq1  -TATTGTCAA-TTACTTTTATTAATGTTGCCTTAGT-GCCCTTTTGCTGA  1042
       ||||||||| ||||||||  | ||| ||||||||| |||||||||||||
seq2  TTATTGTCAATTTACTTTTTATTATG-TGCCTTAGTGGCCCTTTTGCTGA  1046

seq1  AGATTACACAATCAGT-GCGTG-CCACGT  1069
      |||||||||||||||| ||||| ||||||
seq2  AGATTACACAATCAGTGGCGTGCCCACGT  1075