BAC Information

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BAC

Clone NameB6Ng01-335A08
Chromosome15 (Build37)
Map Location 62,393,892 - 62,502,737
singlet/doubletdoublet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502, EG432959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335A08.bB6Ng01-335A08.g
ACCGA120381GA120382
length9831,003
definitionB6Ng01-335A08.b B6Ng01-335A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,501,912 - 62,502,737)(62,393,892 - 62,394,586)
sequence
gaattcactgagatacagatgaccaactgaagactataaccctagttatt
tataatgattcttcataagcatcattcttgataatagagtgacctgaaga
agccatttttctaacatggctactcatattgcaacagataaatgacaatt
agtctaactcctttagatttcaatccgtggtcaggacagaatcaaaattt
tcctttctcttagttttaaagatggagtttctttaaaaactatgaaggtt
tgaaatccgagaaaaggtaataagtaatccatgagatcatacaacaggat
caagctatggtgggaagaattgagaatggtatggtttgaatgatagtagc
cgatataggcttgaatatctgaaggcttggttcctggtcggtggaacttt
tctgggaaagattaggaggtgtggtcttgttgaaagagcgtcaagagggt
gagcatgccaaatgcagtctcagtcagtcatattctctctgtctctctgt
ctctgtctctctgtctgtctctctgtctgtctctctgtctgtttctctct
ctctctctctctctctctctctctctccactccatccccccctttccccc
tctctcttccagctttcagataagattgaagcaggtcttacctgctgctc
cagtaccatgctcatccatctggtgtcatgtttcctgacatgatgacata
atagccatggactcgattctgaaatggtaagcaagacccaattaaatgtg
ttactttataagttgccttgacatggtatcttttcaccagggattttgcc
atggctaaatttttttttcagattgtttaatcacccattgcttcatcgct
cagtcaaagcttaggaaatttcaagtcacaggtctttttctttttgtgtt
ccagattctggtgctcagggactaagctagaggttagcagaattgtctct
ggctcagatttctcatgagcgacattggaggct

gaattcagtggtatccatctttaatctcggcgcaccgcagttagaagcgc
ttagactagatactgacgtaggcagcagtggaccacagatatgttgacaa
ggatcagcatctaaggatatcctctggtctctacacatgcattcatgtgc
ctagcacaacatacaaacaaactgttctggttacattttatcgtcatttt
tttttttcaacttgacacacgatactcaacctgaaacaaggaaccacaat
tgaggaattgtcttggtcagattggcctgtggtcatgtctgtggggcatg
tcatgtggggtaatttacttgattaatggttggcatgggagagtccagcc
cattgtaggcaatgccatccttgggcagataggcctgagctttataatag
gaacctaagaaagtaatggaaagaaaatcagtatgcagcattgcattcct
ctttggtctatatttcggtctctgcttccaaattcctgccctgagttctg
tcttggctgctctcaaggatggattgtaacctggtggccaaaaaaataat
catttcctccccaagttgatgtggcagagattggtaccagagagtggggc
tgctgctgtaataagcccgagtatggtttttggcaggactgtggaaagat
tttgaagctttaagctaacaaagtcattcgagtgctcagagtttaatgag
ctgttgtggcaacctggaaagtaatactgagtgttgcagacaatagaggc
ctggtatgtgaagtttcagagcggagctgagactctaccagggccatttg
tgtaatattttaggtgaggactgtgtagaaatgaattgaatgactggtac
agttaatgctggctagctgagatgaagaatcagctataatgaataagaga
ccagtatcactgagttgaaatctttaggacaaattggcataaatttagac
atattttaggtaaaaggcatgtcaatgatgattactcatcatatcagcca
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62501912_62502737
seq2: B6Ng01-335A08.b_49_875 (reverse)

seq1  AACAATCTG-AAAAAAAATTTAGCCATGGCAAAATCCCTGGTGAAAAGAT  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTGAAAAAAAAATTTAGCCATGGCAAAATCCCTGGTGAAAAGAT  50

seq1  ACCATGTCAAGGCAACTTATAAAGTAACACATTTAATTGGGTCTTGCTTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCAAGGCAACTTATAAAGTAACACATTTAATTGGGTCTTGCTTA  100

seq1  CCATTTCAGAATCGAGTCCATGGCTATTATGTCATCATGTCAGGAAACAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAGAATCGAGTCCATGGCTATTATGTCATCATGTCAGGAAACAT  150

seq1  GACACCAGATGGATGAGCATGGTACTGGAGCAGCAGGTAAGACCTGCTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGATGGATGAGCATGGTACTGGAGCAGCAGGTAAGACCTGCTTC  200

seq1  AATCTTATCTGAAAGCTGGAAGAGAGAGGGGGAAAGGGGGGGATGGAGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATCTGAAAGCTGGAAGAGAGAGGGGGAAAGGGGGGGATGGAGTG  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAGACAGAGAGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAGACAGAGAGACA  300

seq1  GACAGAGAGACAGACAGAGAGACAGAGACAGAGAGACAGAGAGAATATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGAGACAGACAGAGAGACAGAGACAGAGAGACAGAGAGAATATGA  350

seq1  CTGACTGAGACTGCATTTGGCATGCTCACCCTCTTGACGCTCTTTCAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAGACTGCATTTGGCATGCTCACCCTCTTGACGCTCTTTCAACA  400

seq1  AGACCACACCTCCTAATCTTTCCCAGAAAAGTTCCACCGACCAGGAACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACACCTCCTAATCTTTCCCAGAAAAGTTCCACCGACCAGGAACCA  450

seq1  AGCCTTCAGATATTCAAGCCTATATCGGCTACTATCATTCAAACCATACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAGATATTCAAGCCTATATCGGCTACTATCATTCAAACCATACC  500

seq1  ATTCTCAATTCTTCCCACCATAGCTTGATCCTGTTGTATGATCTCATGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAATTCTTCCCACCATAGCTTGATCCTGTTGTATGATCTCATGGA  550

seq1  TTACTTATTACCTTTTCTCGGATTTCAAACCTTCATAGTTTTTAAAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTACCTTTTCTCGGATTTCAAACCTTCATAGTTTTTAAAGAAA  600

seq1  CTCCATCTTTAAAACTAAGAGAAAGGAAAATTTTGATTCTGTCCTGACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTTTAAAACTAAGAGAAAGGAAAATTTTGATTCTGTCCTGACCA  650

seq1  CGGATTGAAATCTAAAGGAGTTAGACTAATTGTCATTTATCTGTTGCAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTGAAATCTAAAGGAGTTAGACTAATTGTCATTTATCTGTTGCAAT  700

seq1  ATGAGTAGCCATGTTAGAAAAATGGCTTCTTCAGGTCACTCTATTATCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAGCCATGTTAGAAAAATGGCTTCTTCAGGTCACTCTATTATCAA  750

seq1  GAATGATGCTTATGAAGAATCATTATAAATAACTAGGGTTATAGTCTTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGCTTATGAAGAATCATTATAAATAACTAGGGTTATAGTCTTCA  800

seq1  GTTGGTCATCTGTATCTCAGTGAATTC  826
      |||||||||||||||||||||||||||
seq2  GTTGGTCATCTGTATCTCAGTGAATTC  827


seq1: chr15_62393892_62394586
seq2: B6Ng01-335A08.g_69_763

seq1  GAATTCAGTGGTATCCATCTTTAATCTCGGCGCACCGCAGTTAGAAGCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTATCCATCTTTAATCTCGGCGCACCGCAGTTAGAAGCGC  50

seq1  TTAGACTAGATACTGACGTAGGCAGCAGTGGACCACAGATATGTTGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTAGATACTGACGTAGGCAGCAGTGGACCACAGATATGTTGACAA  100

seq1  GGATCAGCATCTAAGGATATCCTCTGGTCTCTACACATGCATTCATGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGCATCTAAGGATATCCTCTGGTCTCTACACATGCATTCATGTGC  150

seq1  CTAGCACAACATACAAACAAACTGTTCTGGTTACATTTTATCGTCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACAACATACAAACAAACTGTTCTGGTTACATTTTATCGTCATTTT  200

seq1  TTTTTTTCAACTTGACACACGATACTCAACCTGAAACAAGGAACCACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAACTTGACACACGATACTCAACCTGAAACAAGGAACCACAAT  250

seq1  TGAGGAATTGTCTTGGTCAGATTGGCCTGTGGTCATGTCTGTGGGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATTGTCTTGGTCAGATTGGCCTGTGGTCATGTCTGTGGGGCATG  300

seq1  TCATGTGGGGTAATTTACTTGATTAATGGTTGGCATGGGAGAGTCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGGTAATTTACTTGATTAATGGTTGGCATGGGAGAGTCCAGCC  350

seq1  CATTGTAGGCAATGCCATCCTTGGGCAGATAGGCCTGAGCTTTATAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGGCAATGCCATCCTTGGGCAGATAGGCCTGAGCTTTATAATAG  400

seq1  GAACCTAAGAAAGTAATGGAAAGAAAATCAGTATGCAGCATTGCATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAAGAAAGTAATGGAAAGAAAATCAGTATGCAGCATTGCATTCCT  450

seq1  CTTTGGTCTATATTTCGGTCTCTGCTTCCAAATTCCTGCCCTGAGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCTATATTTCGGTCTCTGCTTCCAAATTCCTGCCCTGAGTTCTG  500

seq1  TCTTGGCTGCTCTCAAGGATGGATTGTAACCTGGTGGCCAAAAAAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTGCTCTCAAGGATGGATTGTAACCTGGTGGCCAAAAAAATAAT  550

seq1  CATTTCCTCCCCAAGTTGATGTGGCAGAGATTGGTACCAGAGAGTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTCCCCAAGTTGATGTGGCAGAGATTGGTACCAGAGAGTGGGGC  600

seq1  TGCTGCTGTAATAAGCCCGAGTATGGTTTTTGGCAGGACTGTGGAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTAATAAGCCCGAGTATGGTTTTTGGCAGGACTGTGGAAAGAT  650

seq1  TTTGAAGCTTTAAGCTAACAAAGTCATTCGAGTGCTCAGAGTTTA  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCTTTAAGCTAACAAAGTCATTCGAGTGCTCAGAGTTTA  695


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