BAC Information

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BAC

Clone NameB6Ng01-337C02
Chromosome15 (Build37)
Map Location 7,331,237 - 7,440,152
singlet/doubletdoublet
Overlap geneEgflam
Upstream geneDab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr
Downstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337C02.bB6Ng01-337C02.g
ACCGA121848GA121849
length347999
definitionB6Ng01-337C02.b B6Ng01-337C02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,331,237 - 7,332,034)(7,439,451 - 7,440,152)
sequence
caccaggctctcttcccctctgtggagaagtggagcccagtcattcagcc
ccatggagcacagagcagggcagagaagaactgaaggcattcttgaggaa
tggggcacaggacaaaagtaaaaaagcagaggctgggagagataaattag
tggataaagtgcttatcataaaaagctgaggagctgagctttgatcttca
gcactcccgaaagaagccaggactggtagctgtaatcccagcactggaga
agcagagacaggaagctccctaataataattggaacctcacttttatggg
catcaatgtatccccccttgtttccttaatatttacttcatcctttc
gaattccattacaggaagagacttaggctgaaggtgtcttcccaatgcca
actccttggatttgattccatctggagaagcttcagctccagcctgctga
catcctggagatgctccagtctcattgatcggatccgtattgccctttga
tgtcagaaaaaggctgagttattccagtttcttgtcgtcggtcttcaagc
aagcccttcatgtatgccatctagaacaagatgcgcacaagcctcagcaa
aacaacacaaagcttgaggattgttgtaagatgcaaacgatgtggccatg
acccgtaagatcaggatcagtgagtgagtaggcatggctagcagcctgct
gcctgtgtgtgcctgagcacttgtcatctcccgggtaacagtggtttaag
actagacagttacttcacatctcttccattccagcccaaatgcaaacacc
cgactgtttggactagcctcgctcgctctatgaataagaaagctcatatc
agacggagcacaaactgtagacaaaataaaaatacaaggaatctgagccc
tagagatgcagatgctgaactgacatttagaagaaggaaacagtgcgggt
gagctcccttccttactggtccgagagcaagttttgttctgtcccttata
gggtagcaaaagctctgaggggagcctagagtgcactgcttacagaacag
gggaattcagagcagccagacatgagaaaaaaaggagctctttgagagac
tcagtaatctcatatataaactctccctcagttctctggctgacccctga
actatgcatacaaagaaaagatcgagactgtcccatctaaagctcgaaga
acagacctgagatttgagatgctctgccaagaaatagaatttgcatttgc
ggttgtttgcagtgaaaacagctgcaaaaccaaacacatttaacagtctt
tgggattatctaatgggggtacagagtttccataggacctagcactgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7331237_7332034
seq2: B6Ng01-337C02.b_53_399

seq1  CACCAGGCTCTCTTCCCCTCTGTGGAGAAGTGGAGCCCAGTCATTCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTCTCTTCCCCTCTGTGGAGAAGTGGAGCCCAGTCATTCAGCC  50

seq1  CCATGGAGCACAGAGCAGGGCAGAGAAGAACTGAAGGCATTCTTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGCACAGAGCAGGGCAGAGAAGAACTGAAGGCATTCTTGAGGAA  100

seq1  TGGGGCACAGGACAAAAGTAAAAAAGCAGAGGCTGGGAGAGATAAATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACAGGACAAAAGTAAAAAAGCAGAGGCTGGGAGAGATAAATTAG  150

seq1  TGGATAAAGTGCTTATCATAAAAAGCTGAGGAGCTGAGCTTTGATCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAGTGCTTATCATAAAAAGCTGAGGAGCTGAGCTTTGATCTTCA  200

seq1  GCACTCCCGAGAGAAGCCAGGACTGGTAGCTGTAATCCCAGCACTGGAGA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCCGAAAGAAGCCAGGACTGGTAGCTGTAATCCCAGCACTGGAGA  250

seq1  AGCAGAGACAGGAAGCTCCCTAATAATAATTGGAACCTCACTTTTATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGACAGGAAGCTCCCTAATAATAATTGGAACCTCACTTTTATGGG  300

seq1  CATAAATGTATCCCCACTTGTTTCCTTAATATTTACTTCATCTTTTCCAT  350
      ||| ||||||||||| |||||||||||||||||||||||||| ||||   
seq2  CATCAATGTATCCCCCCTTGTTTCCTTAATATTTACTTCATCCTTTC---  347

seq1  CAATTTATCATGAAAATATTCAAGCATAAAGAAAACTGAAAGAATTTTAG  400
                                                        
seq2  --------------------------------------------------  347

seq1  AGGGAGCAATATATATATGTGTGTATATATATATATATATATATATATGT  450
                                                        
seq2  --------------------------------------------------  347

seq1  ACATATATATATATATATATATATGCTATGTATATATGTATGTGTATATA  500
                                                        
seq2  --------------------------------------------------  347

seq1  ATATATTCACACTAGACCTCTACATCAATATTTTACTATACTTGATTTAC  550
                                                        
seq2  --------------------------------------------------  347

seq1  CATATATCTGTCTAACAGTCTGTCTGTCTCTCCATCTGTCATCAGGAAAT  600
                                                        
seq2  --------------------------------------------------  347

seq1  CGTATTTCAAAGTCAGTTTCAGACATGAGCACAGTTTCTCTTACCAAATC  650
                                                        
seq2  --------------------------------------------------  347

seq1  CTTGTTCCATTTATGCTTAATCTCACGTGTGATGTGACTCATTTGGAACG  700
                                                        
seq2  --------------------------------------------------  347

seq1  CTCTATTATGTGTGCCCTCACGTGTGTATTGTCATAAATTTCTTGATATA  750
                                                        
seq2  --------------------------------------------------  347

seq1  CAGATGGATCAAGAAGTCAGTTAACTGGTCAATCGATCGGGAGCTTTC  798
                                                      
seq2  ------------------------------------------------  347

seq1: chr15_7439451_7440152
seq2: B6Ng01-337C02.g_63_764 (reverse)

seq1  CCCTGTTCTGTAAGCAGTGCACTCTAGGCTCCCCTCAGAGCTTTTGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTGTAAGCAGTGCACTCTAGGCTCCCCTCAGAGCTTTTGCTAC  50

seq1  CCTATAAGGGACAGAACAAAACTTGCTCTCGGACCAGTAAGGAAGGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAGGGACAGAACAAAACTTGCTCTCGGACCAGTAAGGAAGGGAGC  100

seq1  TCACCCGCACTGTTTCCTTCTTCTAAATGTCAGTTCAGCATCTGCATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCGCACTGTTTCCTTCTTCTAAATGTCAGTTCAGCATCTGCATCTC  150

seq1  TAGGGCTCAGATTCCTTGTATTTTTATTTTGTCTACAGTTTGTGCTCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTCAGATTCCTTGTATTTTTATTTTGTCTACAGTTTGTGCTCCGT  200

seq1  CTGATATGAGCTTTCTTATTCATAGAGCGAGCGAGGCTAGTCCAAACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATGAGCTTTCTTATTCATAGAGCGAGCGAGGCTAGTCCAAACAGT  250

seq1  CGGGTGTTTGCATTTGGGCTGGAATGGAAGAGATGTGAAGTAACTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTTTGCATTTGGGCTGGAATGGAAGAGATGTGAAGTAACTGTCTA  300

seq1  GTCTTAAACCACTGTTACCCGGGAGATGACAAGTGCTCAGGCACACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAACCACTGTTACCCGGGAGATGACAAGTGCTCAGGCACACACAG  350

seq1  GCAGCAGGCTGCTAGCCATGCCTACTCACTCACTGATCCTGATCTTACGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGCTGCTAGCCATGCCTACTCACTCACTGATCCTGATCTTACGG  400

seq1  GTCATGGCCACATCGTTTGCATCTTACAACAATCCTCAAGCTTTGTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGCCACATCGTTTGCATCTTACAACAATCCTCAAGCTTTGTGTTG  450

seq1  TTTTGCTGAGGCTTGTGCGCATCTTGTTCTAGATGGCATACATGAAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGAGGCTTGTGCGCATCTTGTTCTAGATGGCATACATGAAGGGC  500

seq1  TTGCTTGAAGACCGACGACAAGAAACTGGAATAACTCAGCCTTTTTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGAAGACCGACGACAAGAAACTGGAATAACTCAGCCTTTTTCTGA  550

seq1  CATCAAAGGGCAATACGGATCCGATCAATGAGACTGGAGCATCTCCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAGGGCAATACGGATCCGATCAATGAGACTGGAGCATCTCCAGGA  600

seq1  TGTCAGCAGGCTGGAGCTGAAGCTTCTCCAGATGGAATCAAATCCAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCAGGCTGGAGCTGAAGCTTCTCCAGATGGAATCAAATCCAAGGA  650

seq1  GTTGGCATTGGGAAGACACCTTCAGCCTAAGTCTCTTCCTGTAATGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATTGGGAAGACACCTTCAGCCTAAGTCTCTTCCTGTAATGGAAT  700

seq1  TC  702
      ||
seq2  TC  702