BAC Information

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BAC

Clone NameB6Ng01-339I12
Chromosome15 (Build37)
Map Location 32,046,109 - 32,105,171
singlet/doubletdoublet
Overlap genenone
Upstream geneDap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231
Downstream geneTas2r119, 0610007N19Rik, Sema5a, LOC100040962, Sdc2, Pgcp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339I12.bB6Ng01-339I12.g
ACCGA123506GA123507
length5471,121
definitionB6Ng01-339I12.b B6Ng01-339I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,046,109 - 32,046,661)(32,104,052 - 32,105,171)
sequence
aggagcaatgagaaagactgagccagtgtctgtggagtaggatgtcaagt
ctttcagatagatgtattacaaagaggggtatcactgggtcagatgatag
attcatttttagccatttgggtgttctccatactaacttccaaagtacct
caataggttgtgattctatgtttattcattaataggcatatataacaaca
attgataaagaaaaaaaataacatgactttgaggggcatgggtgggagga
atgtgagggatgagagggataaatattataatcctattttagttaagtac
aaaatacaaatttaaaaacgcctacactgacgaagccagctcagtcagtc
aacaggggtctcaagggagagcgtgaggattgaaaaagaagaaaaacagt
tagacaacattgcaacatgattccaggcagtagtgaggctgaagcagctg
tattctttcccagtctgcttttatatccttctaggtacatccaaaacacg
cggtctgttcttagatcaaagactaagtaatcaagcaaagtattaaa
gaattcattggcagagtgaaaaatgaggacagtttataaacgttgggtaa
attaaaacttccagcttagtacttaataaaatgctcaccagatcttgtaa
caaagtgtaactccttctggaaacatgttactttgtcccagggggtcaga
caggattctccccagaaccttatttatagacaactagaagaggaaggacg
aaaaattaagtggcagtcactctccttaagacactattgctctgtgaatt
cttaacagtttcatgtagggttgcctcatctttggtgaggtggagggaag
caacaggaaagctctcaggcagcagtcaagggaggcagtttgggagtgga
cactcccacatagatccaagttggaggagcatcctgatgggacaagagtc
attcttcttcctctattgaaaggaagaccttcaatgcaaagcactatcat
tctgcacatggctggctaagaaagcaaagtggaggagcacccatctatgg
cagagagaagctgtgaactccaaaggaaaaaaccccatggacttcctcat
tttctcattcaagccttctgcttccattgcaaacgtgactgcttgcccta
agcaccatgaggctcgccactcactcatgcattcactcatccattcattg
cttggcttgtgaagtagaaccaaactcaactacaacacagcagagggcag
gttgagacacaagtcctgaccaacaggcacacaaccctaacagttcactt
tgtctcttttagcatggccatattatttacagcatggatcagtccttgat
gtgcttccagcatgggccaaagacagttcgccattgcaaactagatcact
agagcatgcatagcacaaaagagcagaaggaaggcttgagcccagagcaa
cagtatgacctctcaatgctgacagaaaaaacagaagagggaacacacaa
tctgccaggaagttcaatcatgcccaaaccttaagtgctcttgcatccta
gcatctgtagaggctactgggattctcagaatagttcattgtaacttgtt
agatcaggctgagataagaagacacccatgggccggggaccacaagttat
aaggattagctacagcatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32046109_32046661
seq2: B6Ng01-339I12.b_48_600

seq1  GAATTCAGGAGCAATGAGAAAGACTGAGCCAGTGTCTGTGGAGTAGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCAATGAGAAAGACTGAGCCAGTGTCTGTGGAGTAGGATG  50

seq1  TCAAGTCTTTCAGATAGATGTATTACAAAGAGGGGTATCACTGGGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCTTTCAGATAGATGTATTACAAAGAGGGGTATCACTGGGTCAGA  100

seq1  TGATAGATTCATTTTTAGCCATTTGGGTGTTCTCCATACTAACTTCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATTCATTTTTAGCCATTTGGGTGTTCTCCATACTAACTTCCAAA  150

seq1  GTACCTCAATAGGTTGTGATTCTATGTTTATTCATTAATAGGCATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCAATAGGTTGTGATTCTATGTTTATTCATTAATAGGCATATATA  200

seq1  ACAACAATTGATAAAGAAAAAAAATAACATGACTTTGAGGGGCATGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATTGATAAAGAAAAAAAATAACATGACTTTGAGGGGCATGGGTG  250

seq1  GGAGGAATGTGAGGGATGAGAGGGATAAATATTATAATCCTATTTTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATGTGAGGGATGAGAGGGATAAATATTATAATCCTATTTTAGTT  300

seq1  AAGTACAAAATACAAATTTAAAAACGCCTACACTGACGAAGCCAGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAAATACAAATTTAAAAACGCCTACACTGACGAAGCCAGCTCAG  350

seq1  TCAGTCAACAGGGGTCTCAAGGGAGAGCGTGAGGATTGAAAAAGAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAACAGGGGTCTCAAGGGAGAGCGTGAGGATTGAAAAAGAAGAAA  400

seq1  AACAGTTAGACAACATTGCAACATGATTCCAGGCAGTAGTGAGGCTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAGACAACATTGCAACATGATTCCAGGCAGTAGTGAGGCTGAAG  450

seq1  CAGCTGTATTCTTTCCCAGTCTGCTTTTATATCCTTCTAGGTACATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTATTCTTTCCCAGTCTGCTTTTATATCCTTCTAGGTACATCCAA  500

seq1  AACACGCGGTCAGTTCTTAGATCAAAGACAAAGTAATCAAGCAAAGTAGT  550
      ||||||||||| ||||||||||||||||| |||||||||||||||||| |
seq2  AACACGCGGTCTGTTCTTAGATCAAAGACTAAGTAATCAAGCAAAGTATT  550

seq1  AAA  553
      |||
seq2  AAA  553

seq1: chr15_32104052_32105171
seq2: B6Ng01-339I12.g_67_1187 (reverse)

seq1  GAAAAGCTGTAGCTTAATCCTTATAACTTGTGGTCCCCCCGCCCAT-GGT  49
      |||| |||||||| |||||||||||||||||||| |||| |||||| |||
seq2  GAAATGCTGTAGC-TAATCCTTATAACTTGTGGT-CCCCGGCCCATGGGT  48

seq1  GTCT--CTATCCTTCAGGCTGGTTCTAACAAGTTACAATGAACTA-TCTG  96
      ||||   ||||  |||| || | |||||||||||||||||||||| ||||
seq2  GTCTTCTTATC--TCAGCCT-GATCTAACAAGTTACAATGAACTATTCTG  95

seq1  AGAAT-CCAGTAGCCTCTACAGATGCTAGGATGCAAGAGGCACTT-AGGG  144
      ||||| |||||||||||||||||||||||||||||||| |||||| ||| 
seq2  AGAATCCCAGTAGCCTCTACAGATGCTAGGATGCAAGA-GCACTTAAGGT  144

seq1  TTGGGCATGATTGAACTTCCTGGCAGATTGTGTGTTCCCTCTTCTG-TTT  193
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGGGCATGATTGAACTTCCTGGCAGATTGTGTGTTCCCTCTTCTGTTTT  194

seq1  TTCTGTCAGCATTGAGAGGTCATACTGTTGCTCTGGGCTCAAGCCTTCCT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAGCATTGAGAGGTCATACTGTTGCTCTGGGCTCAAGCCTTCCT  244

seq1  TCTGCTCTTTTGTGCTATGCATGCTCTAGTGATCTAGTTTGCAATGGCGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTTTTGTGCTATGCATGCTCTAGTGATCTAGTTTGCAATGGCGA  294

seq1  ACTGTCTTTGGCCCATGCTGGAAGCACATCAAGGACTGATCCATGCTGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTTTGGCCCATGCTGGAAGCACATCAAGGACTGATCCATGCTGTA  344

seq1  AATAATATGGCCATGCTAAAAGAGACAAAGTGAACTGTTAGGGTTGTGTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATGGCCATGCTAAAAGAGACAAAGTGAACTGTTAGGGTTGTGTG  394

seq1  CCTGTTGGTCAGGACTTGTGTCTCAACCTGCCCTCTGCTGTGTTGTAGTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGTCAGGACTTGTGTCTCAACCTGCCCTCTGCTGTGTTGTAGTT  444

seq1  GAGTTTGGTTCTACTTCACAAGCCAAGCAATGAATGGATGAGTGAATGCA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGGTTCTACTTCACAAGCCAAGCAATGAATGGATGAGTGAATGCA  494

seq1  TGAGTGAGTGGCGAGCCTCATGGTGCTTAGGGCAAGCAGTCACGTTTGCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGTGGCGAGCCTCATGGTGCTTAGGGCAAGCAGTCACGTTTGCA  544

seq1  ATGGAAGCAGAAGGCTTGAATGAGAAAATGAGGAAGTCCATGGGGTTTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCAGAAGGCTTGAATGAGAAAATGAGGAAGTCCATGGGGTTTTT  594

seq1  TCCTTTGGAGTTCACAGCTTCTCTCTGCCATAGATGGGTGCTCCTCCACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGAGTTCACAGCTTCTCTCTGCCATAGATGGGTGCTCCTCCACT  644

seq1  TTGCTTTCTTAGCCAGCCATGTGCAGAATGATAGTGCTTTGCATTGAAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTTAGCCAGCCATGTGCAGAATGATAGTGCTTTGCATTGAAGG  694

seq1  TCTTCCTTTCAATAGAGGAAGAAGAATGACTCTTGTCCCATCAGGATGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTCAATAGAGGAAGAAGAATGACTCTTGTCCCATCAGGATGCT  744

seq1  CCTCCAACTTGGATCTATGTGGGAGTGTCCACTCCCAAACTGCCTCCCTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAACTTGGATCTATGTGGGAGTGTCCACTCCCAAACTGCCTCCCTT  794

seq1  GACTGCTGCCTGAGAGCTTTCCTGTTGCTTCCCTCCACCTCACCAAAGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTGCCTGAGAGCTTTCCTGTTGCTTCCCTCCACCTCACCAAAGAT  844

seq1  GAGGCAACCCTACATGAAACTGTTAAGAATTCACAGAGCAATAGTGTCTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAACCCTACATGAAACTGTTAAGAATTCACAGAGCAATAGTGTCTT  894

seq1  AAGGAGAGTGACTGCCACTTAATTTTTCGTCCTTCCTCTTCTAGTTGTCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGTGACTGCCACTTAATTTTTCGTCCTTCCTCTTCTAGTTGTCT  944

seq1  ATAAATAAGGTTCTGGGGAGAATCCTGTCTGACCCCCTGGGACAAAGTAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGGTTCTGGGGAGAATCCTGTCTGACCCCCTGGGACAAAGTAA  994

seq1  CATGTTTCCAGAAGGAGTTACACTTTGTTACAAGATCTGGTGAGCATTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCCAGAAGGAGTTACACTTTGTTACAAGATCTGGTGAGCATTTT  1044

seq1  ATTAAGTACTAAGCTGGAAGTTTTAATTTACCCAACGTTTATAAACTGTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTACTAAGCTGGAAGTTTTAATTTACCCAACGTTTATAAACTGTC  1094

seq1  CTCATTTTTCACTCTGCCAATGAATTC  1120
      |||||||||||||||||||||||||||
seq2  CTCATTTTTCACTCTGCCAATGAATTC  1121