BAC Information

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BAC

Clone NameB6Ng01-340G21
Chromosome15 (Build37)
Map Location 93,747,846 - 93,780,640
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340G21.bB6Ng01-340G21.g
ACCGA124138GA124139
length1,136220
definitionB6Ng01-340G21.b B6Ng01-340G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,779,496 - 93,780,640)(93,747,846 - 93,748,065)
sequence
gaattcctcacagggctcaggccatacatggcaaggccaacattgacttt
taggggaggtaatctgccacaaagcttattagagctacttttaaagcaat
tttagaaaatatctccccccccccaatttaagatcaatgggagtcataca
taatcaagaacagctgtgagccatggagattctgacagaagatccatgct
aagcatcacataagcagatcaaaaaagaacactgagaggatctgcccctt
cttttatagatggataaatgggtaaatggatgaggagttgtgctccgctg
aggggaccatgtgatggtttaatccctaaggaacaccctaaagactggtc
ttctgattttccatctcccattggccctccccaaagaagagtccaacgac
tttagtcgctgtggaacacagttcacaacacgtgacaaaggaaagtgtta
gctacacttcgagcgttctggaatgaaaacagcctacctggcttagtagt
cagctcaagtcactgatctatacccaagagttgacaatactgagtccatc
agtcactaagcacgactggtgacaaatgtccttgttgctttggaaaatca
gaaaggaaaaaaggtacaaaccactgtttcttacacttcaatctgttcct
ataaaatgtaataaacttgacacaagaaataatatgtgtctaggacatag
ctcccctccccctagaaaaaacaacctagcagctgttgctgaaacaacag
tctctctgaccgtcaccttgcctcagagtcattttcaaggaaggaactaa
ctaggttaagttagaagcagccactaaccactgcccaatagggagtaaag
gtttgccttgccttagtgaatacaatgaataactgagaggattttaatca
actggggaggcatacaatgagacaggttaggatgaaggggtaaagccatg
gaggtcactacagaccttatctaacaagaatgagaatggtctgctcacaa
aggcagatacaaagtgcccctgtcctgtctttttttctttttcttctttt
caaacatgagggagaagtccctctttactgagaactacaccgtgttagta
caaacaggaaagctcagtcagaagtgagttctctga
ctagaagtttcatagagttacatacttcctagagttacatactggggtgt
gttctagtgaaaaaaaagaaattagcaccttaaaacatggctgatagcag
gtatatcaacctgtttagtaattagtccctaagtgaccttgagaacaaat
acggattttaagaaatgggaagtgggattattaaattcagatggggtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93779496_93780640
seq2: B6Ng01-340G21.b_46_1181 (reverse)

seq1  TCAGAG-ACTCACTTCTGACTGAAGCTTTTCTGTTTTGTACTTAACAC-G  48
      |||||| ||||||||||||||| |||||| ||| ||||||| |||||| |
seq2  TCAGAGAACTCACTTCTGACTG-AGCTTTCCTG-TTTGTAC-TAACACGG  47

seq1  TGTAGTTCTCAGTAAAAGAGGGGACTCTCCCTTCATTGTTTGAAAAGGAA  98
      ||||||||||||| ||||||||   |||||| ||| |||||||||| |||
seq2  TGTAGTTCTCAGT-AAAGAGGGACTTCTCCC-TCA-TGTTTGAAAA-GAA  93

seq1  GAAAAAAGAAAAAAAAGACAGGACAGGGGCACTTTGTTATCTGCCTTTGT  148
      ||||||   ||||||||||||||||||||||||||| |||||||||||||
seq2  GAAAAA--GAAAAAAAGACAGGACAGGGGCACTTTG-TATCTGCCTTTGT  140

seq1  GAGCAGACCATTCTCATTCTTGTTAGATAAGGTCTGTAGTGACCTCCATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACCATTCTCATTCTTGTTAGATAAGGTCTGTAGTGACCTCCATG  190

seq1  GCTTTACCCCTTCATCCTAACCTGTCTCATTGTATGCCTCCCCAGTTGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACCCCTTCATCCTAACCTGTCTCATTGTATGCCTCCCCAGTTGAT  240

seq1  TAAAATCCTCTCAGTTATTTCATTGTATTCACTAAGGCAAGGCAAACCTT  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAAATCCTCTCAGTTA-TTCATTGTATTCACTAAGGCAAGGCAAACCTT  289

seq1  TACTCCCTATTGGGCAGTGGTTAGTGGCTGCTTCTAACTTAACCTAGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCTATTGGGCAGTGGTTAGTGGCTGCTTCTAACTTAACCTAGTTA  339

seq1  GTTCCTTCCTTGAAAATGACTCTGAGGCAAGGTGACGGTCAGAGAGACTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCCTTGAAAATGACTCTGAGGCAAGGTGACGGTCAGAGAGACTG  389

seq1  TTGTTTCAGCAACAGCTGCTAGGTTGTTTTTTCTAGGGGGAGGGGAGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCAGCAACAGCTGCTAGGTTGTTTTTTCTAGGGGGAGGGGAGCTA  439

seq1  TGTCCTAGACACATATTATTTCTTGTGTCAAGTTTATTACATTTTATAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGACACATATTATTTCTTGTGTCAAGTTTATTACATTTTATAGG  489

seq1  AACAGATTGAAGTGTAAGAAACAGTGGTTTGTACCTTTTTTCCTTTCTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTGAAGTGTAAGAAACAGTGGTTTGTACCTTTTTTCCTTTCTGA  539

seq1  TTTTCCAAAGCAACAAGGACATTTGTCACCAGTCGTGCTTAGTGACTGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAAGCAACAAGGACATTTGTCACCAGTCGTGCTTAGTGACTGAT  589

seq1  GGACTCAGTATTGTCAACTCTTGGGTATAGATCAGTGACTTGAGCTGACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAGTATTGTCAACTCTTGGGTATAGATCAGTGACTTGAGCTGACT  639

seq1  ACTAAGCCAGGTAGGCTGTTTTCATTCCAGAACGCTCGAAGTGTAGCTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCCAGGTAGGCTGTTTTCATTCCAGAACGCTCGAAGTGTAGCTAA  689

seq1  CACTTTCCTTTGTCACGTGTTGTGAACTGTGTTCCACAGCGACTAAAGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCCTTTGTCACGTGTTGTGAACTGTGTTCCACAGCGACTAAAGTC  739

seq1  GTTGGACTCTTCTTTGGGGAGGGCCAATGGGAGATGGAAAATCAGAAGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACTCTTCTTTGGGGAGGGCCAATGGGAGATGGAAAATCAGAAGAC  789

seq1  CAGTCTTTAGGGTGTTCCTTAGGGATTAAACCATCACATGGTCCCCTCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTAGGGTGTTCCTTAGGGATTAAACCATCACATGGTCCCCTCAG  839

seq1  CGGAGCACAACTCCTCATCCATTTACCCATTTATCCATCTATAAAAGAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCACAACTCCTCATCCATTTACCCATTTATCCATCTATAAAAGAAG  889

seq1  GGGCAGATCCTCTCAGTGTTCTTTTTTGATCTGCTTATGTGATGCTTAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGATCCTCTCAGTGTTCTTTTTTGATCTGCTTATGTGATGCTTAGC  939

seq1  ATGGATCTTCTGTCAGAATCTCCATGGCTCACAGCTGTTCTTGATTATGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTTCTGTCAGAATCTCCATGGCTCACAGCTGTTCTTGATTATGT  989

seq1  ATGACTCCCATTGATCTTAAATTGGGGGGGGGGAGATATTTTCTAAAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCCCATTGATCTTAAATTGGGGGGGGGGAGATATTTTCTAAAATT  1039

seq1  GCTTTAAAAGTAGCTCTAATAAGCTTTGTGGCAGATTACCTCCCCTAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAAGTAGCTCTAATAAGCTTTGTGGCAGATTACCTCCCCTAAAA  1089

seq1  GTCAATGTTGGCCTTGCCATGTATGGCCTGAGCCCTGTGAGGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTTGGCCTTGCCATGTATGGCCTGAGCCCTGTGAGGAATTC  1136

seq1: chr15_93747846_93748065
seq2: B6Ng01-340G21.g_73_292

seq1  CTAGAAGTTTCATAGAGTTACATACTTCCTAGAGTTACATACTGGGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGTTTCATAGAGTTACATACTTCCTAGAGTTACATACTGGGGTGT  50

seq1  GTTCTAGTGAAAAAAAAGAAATTAGCACCTTAAAACATGGCTGATAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGTGAAAAAAAAGAAATTAGCACCTTAAAACATGGCTGATAGCAG  100

seq1  GTATATCAACCTGTTTAGTAATTAGTCCCTAAGTGACCTTGAGAACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCAACCTGTTTAGTAATTAGTCCCTAAGTGACCTTGAGAACAAAT  150

seq1  ACGGATTTTAAGAAATGGGAAGTGGGATTATTAAATTCAGATGGGGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATTTTAAGAAATGGGAAGTGGGATTATTAAATTCAGATGGGGTGTG  200

seq1  TGTGTGTGTGTGTGTGTGTG  220
      ||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTG  220