This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
B6Ng01-340M15
Chromosome
15 (Build37)
Map Location
68,860,462 - 68,981,128
singlet/doublet
doublet
Overlap gene
Khdrbs3
Upstream gene
Zfat1
,
LOC100041000
,
EG665945
,
EG633752
Downstream gene
LOC383050
Link
Open Mouse BAC browser
Click to get alignment info.
name
Zfat1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:380993
MGI:2681865
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100041000
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041000
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1161 ESTs, 10 Proteins
name
EG665945
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:665945
MGI:3646834
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 68 ESTs, 9 Proteins
pseudo
: _no_value
name
EG633752
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:633752
MGI:3645829
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 461 ESTs, 10 Proteins
name
Khdrbs3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13992
MGI:1313312
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC383050
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:383050
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins
pseudo
: _no_value
name
Zfat1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:38348525
GeneID:380993
MGI:2681865
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: ZFAT zinc finger 1
transcript_id
: NM_198644.1
name
LOC100041000
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149266648
GeneID:100041000
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 869 ESTs, 10 Proteins
product
: similar to ribosomal protein L21, transcript variant 2
transcript_id
: XM_001476222.1
name
LOC100041000
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149266646
GeneID:100041000
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1160 ESTs, 10 Proteins
product
: similar to ribosomal protein L21, transcript variant 1
transcript_id
: XM_001476204.1
name
EG633752
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149266650
GeneID:633752
MGI:3645829
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 461 ESTs, 10 Proteins
product
: predicted gene, EG633752
transcript_id
: XM_980525.2
name
Khdrbs3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:117647235
GeneID:13992
MGI:1313312
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: KH domain containing, RNA binding, signal transduction associated 3
transcript_id
: NM_010158.2
name
Zfat1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:38348526
GeneID:380993
MGI:2681865
definition
GO_component
: GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]
GO_function
: GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO_process
: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]
codon_start
: 1
note
: zinc finger protein 403
product
: zinc finger protein 406
protein_id
: NP_941046.1
name
LOC100041000
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149266647
GeneID:100041000
definition
codon_start
: 1
product
: hypothetical protein isoform 1
protein_id
: XP_001476254.1
name
LOC100041000
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149266649
GeneID:100041000
definition
codon_start
: 1
product
: hypothetical protein isoform 2
protein_id
: XP_001476272.1
name
EG633752
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149266651
GeneID:633752
MGI:3645829
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_985619.2
name
Khdrbs3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:117647236
CCDS:CCDS27513.1
GeneID:13992
MGI:1313312
definition
GO_component
: GO:0005634 - nucleus [Evidence IEA]
GO_function
: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]
GO_process
: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]
codon_start
: 1
note
: etoile
product
: KH domain containing, RNA binding, signal transduction associated 3
protein_id
: NP_034288.2
name
EG665945
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:94398708
GeneID:665945
MGI:3646834
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 68 ESTs, 9 Proteins
product
: predicted gene, EG665945
pseudo
: _no_value
transcript_id
: XR_001805.1
name
LOC383050
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149266629
GeneID:383050
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins
product
: similar to pyruvate kinase 3
pseudo
: _no_value
transcript_id
: XR_032148.1
clone name
MSMg01-546I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300O10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-262A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-541L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-166N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-098J21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-335P24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-326J06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-138J08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-090K05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538P18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-457E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-469I08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-139M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-424N21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336D20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236D01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-479L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521A08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530M13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-400D13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120M24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-398J05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-125G02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-407K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083K09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-087O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-485P07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-383K13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-423H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-396G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-463B01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-162J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-153M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530M21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477L06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-539J05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105G15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-144L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-544H16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-372C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-345C22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-295H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408E22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-264I22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-218F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-218F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-427G02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460A04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-519G21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341B18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-399D04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-492J06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-508I13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-422O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-464F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-106K09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-207N07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-535C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440E06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104G09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-339P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-437G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-062F09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098H02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-129I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-104C16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-183B06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-368G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-448I09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-051C11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-360L08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416P12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-514D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-263D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164K05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-071J18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-128D01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-465M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-255G12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291K19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-172K12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-238C08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-231D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-287O07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120H15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-090M02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-083E05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-276K07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-151D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-013J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258K14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-136M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155I20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001B22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-171F24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-007F24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-255M08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-114J22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052M18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-174K20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-089F18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010E04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341E18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-159N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-328O14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169D12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-108H13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104D24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-132A17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-148L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-261K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-205C19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060K05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-161C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-123C13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057C01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155M15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-340M15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-164N10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-003C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-136K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164F12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-191O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-174N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-014O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157K09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-195N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-187O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-103C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-271M16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-051N06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224H20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-167M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-158O08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026P23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-187L21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-213M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-051D20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-071K20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-119I09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-117I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-041B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239E18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-143D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163B17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-171A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-015A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-271B09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121C11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-108B16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-149L23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104I21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-299L15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-327I06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-310E22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-059P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-317B17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200I06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-025N20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-027P12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-227M15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-076H11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274E13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-276F23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-154F17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109J11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162O03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-064L05
singlet/doublet
doublet
plural/unique
unique