BAC Information

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BAC

Clone NameB6Ng01-341F20
Chromosome15 (Build37)
Map Location 81,855,825 - 81,929,861
singlet/doubletdoublet
Overlap geneXrcc6, Nhp2l1, 4930407I10Rik, Mei1
Upstream geneMkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e
Downstream geneCcdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341F20.bB6Ng01-341F20.g
ACCGA124768GA124769
length4751,029
definitionB6Ng01-341F20.b B6Ng01-341F20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,929,381 - 81,929,861)(81,855,825 - 81,856,836)
sequence
taatttcaattcaactccttttctaccgacatgctccgtaatgaaaacaa
gcataacgagacgagtatccttgaccctcgcacacccctctcctgtgaga
cacacaggaagatacagccacgagtacacaagtcagtctacctctcttcc
tggtgctttgagatctgacaagcacccagcgcccaagggaacaggtgagg
ggggtttcctttgttctgacaaatgagggaattgtcagaggccacggtga
tgtggttgccaagagtttggggccaccacagcacaggcatggtggccttc
tctctgcaagttacacctgacaggcaggctgctgggaaacgtgcagctga
gactggctagtgtaataaaagaacggatcccggtcatacgggaagtaatg
ggaatgcttggctggactcctgtctgtctcggcatggtacctgagagaga
gtggatgggagagataggggagtaa
gaattccaggccaccctggcctacaaagtgagttctgtctcaaaagaaaa
aacagtaattcccatttgctgtccttcgctatccctggttttaatctttc
ttcacaccagggatcttccttgacttgatgcatctgaagaagccaggagg
ctttgatgtatccgtgttctacagggacatcatcaccaccgctgaggacg
aggaccttggggttcacttcgaggagtcaagcaagctggaagacctgcta
aggaaggttcgagccaaggagaccaaaaagcgagttctgtccaggtgggc
acccagcctgggctagcctgctcatacctcccttaacaaatcgcaggcaa
ggcatagatttgacttccccacactgttctcccactggcctcctcgggat
agcatgaactgtcagttcttccccagcagggtatgtctccacagtcacgc
agcagccttctgtgtccttgagcgctaagtactctgagcatcccttgata
cctcctcccctctctgtccatggcagatggtagtgacctctgcaccatta
ggttatttatcgtaaggagtgagtcagagacatctaacatacaagtacgc
ttaacagatgctatgtattgataagtttatatatatgtatgggtgcctat
gtatgaaacaggggaacaggcattggcttccttagaactggaattataga
tggttgtgaggcacctgatgtggatgctgggaattgaactcaggacctct
ggaagagcagtaaagtgctcttaaccactgcaccatctctccagctgcca
ggtgttagttatcgtcatttaaaatttatattatcattcagctaaataag
ctggctctcctaggtaaaggtgcattgctggcaagcctgacgccctgaag
ttctcctccctgggaaccccttgtagtggaggaaagggccaaccttctca
agcctgccctcttgccctcccacaccccgcgtctgtggatgtgccaccct
cccccaagattaattagtgctttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81929381_81929861
seq2: B6Ng01-341F20.b_48_528 (reverse)

seq1  TTACTCCCCTATCTCTCCCATCCACTCTCTCTCAGGTACCATGCCGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCCCTATCTCTCCCATCCACTCTCTCTCAGGTACCATGCCGAGAC  50

seq1  AGACAGGAGTCCAGCCAAGCATTCCCATTACTTCCCGTATGACCGGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGTCCAGCCAAGCATTCCCATTACTTCCCGTATGACCGGGATC  100

seq1  CGTTCTTTTATTACACTAGCCAGTCTCAGCTGCACGTTTCCCAGCAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTTTATTACACTAGCCAGTCTCAGCTGCACGTTTCCCAGCAGCCT  150

seq1  GCCTGTCAGGTGTAACTTGCAGAGAGAAGGCCACCATGCCTGTGCTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCAGGTGTAACTTGCAGAGAGAAGGCCACCATGCCTGTGCTGTGG  200

seq1  TGGCCCCAAACTCTTGGCAACCACATCACCGTGGCCTCTGACAATTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCAAACTCTTGGCAACCACATCACCGTGGCCTCTGACAATTCCCT  250

seq1  CATTTGTCAGAACAAAGGAAACCCCCCTCACCTGTTCCCTTGGGCGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCAGAACAAAGGAAACCCCCCTCACCTGTTCCCTTGGGCGCTGG  300

seq1  GTGCTTGTCAGATCTCAAAGCACCAGGAAGAGAGGTAGACTGACTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGTCAGATCTCAAAGCACCAGGAAGAGAGGTAGACTGACTTGTGT  350

seq1  ACTCGTGGCTGTATCTTCCTGTGTGTCTCACAGGAGAGGGGTGTGCGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTGGCTGTATCTTCCTGTGTGTCTCACAGGAGAGGGGTGTGCGAGG  400

seq1  GTCAAGGATACTCGTCTCGTTATGCTTGTTTTCATTACGGAGCATGTCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGATACTCGTCTCGTTATGCTTGTTTTCATTACGGAGCATGTCGG  450

seq1  TAGAAAAGGAGTTGAATTGAAATTAGAATTC  481
      |||||||||||||||||||||||||||||||
seq2  TAGAAAAGGAGTTGAATTGAAATTAGAATTC  481

seq1: chr15_81855825_81856836
seq2: B6Ng01-341F20.g_69_1097

seq1  GAATTCCAGGCCACCCTGGCCTACAAAGTGAGTTCTGTCTCAAAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCACCCTGGCCTACAAAGTGAGTTCTGTCTCAAAAGAAAA  50

seq1  AACAGTAATTCCCATTTGCTGTCCTTCGCTATCCCTGGTTTTAATCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATTCCCATTTGCTGTCCTTCGCTATCCCTGGTTTTAATCTTTC  100

seq1  TTCACACCAGGGATCTTCCTTGACTTGATGCATCTGAAGAAGCCAGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACCAGGGATCTTCCTTGACTTGATGCATCTGAAGAAGCCAGGAGG  150

seq1  CTTTGATGTATCCGTGTTCTACAGGGACATCATCACCACCGCTGAGGACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGTATCCGTGTTCTACAGGGACATCATCACCACCGCTGAGGACG  200

seq1  AGGACCTTGGGGTTCACTTCGAGGAGTCAAGCAAGCTGGAAGACCTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTGGGGTTCACTTCGAGGAGTCAAGCAAGCTGGAAGACCTGCTA  250

seq1  AGGAAGGTTCGAGCCAAGGAGACCAAAAAGCGAGTTCTGTCCAGGTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTTCGAGCCAAGGAGACCAAAAAGCGAGTTCTGTCCAGGTGGGC  300

seq1  ACCCAGCCTGGGCTAGCCTGCTCATACCTCCCTTAACAAATCGCAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCCTGGGCTAGCCTGCTCATACCTCCCTTAACAAATCGCAGGCAA  350

seq1  GGCATAGATTTGACTTCCCCACACTGTTCTCCCACTGGCCTCCTCGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGATTTGACTTCCCCACACTGTTCTCCCACTGGCCTCCTCGGGAT  400

seq1  AGCATGAACTGTCAGTTCTTCCCCAGCAGGGTATGTCTCCACAGTCACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAACTGTCAGTTCTTCCCCAGCAGGGTATGTCTCCACAGTCACGC  450

seq1  AGCAGCCTTCTGTGTCCTTGAGCGCTAAGTACTCTGAGCATCCCTTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTCTGTGTCCTTGAGCGCTAAGTACTCTGAGCATCCCTTGATA  500

seq1  CCTCCTCCCCTCTCTGTCCATGGCAGATGGTAGTGACCTCTGCACCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCCTCTCTGTCCATGGCAGATGGTAGTGACCTCTGCACCATTA  550

seq1  GGTTATTTATCGTAAGGAGTGAGTCAGAGACATCTAACATACAAGTACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTATCGTAAGGAGTGAGTCAGAGACATCTAACATACAAGTACGC  600

seq1  TTAACAGATGCTATGTATTGATAAG-TTATATATATGTATGGGTGCCTAT  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAACAGATGCTATGTATTGATAAGTTTATATATATGTATGGGTGCCTAT  650

seq1  GTATGAAACAGGGGAACAGGCATTGGCTTCCTTAGAACTGGAATTATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAACAGGGGAACAGGCATTGGCTTCCTTAGAACTGGAATTATAGA  700

seq1  TGGTTGTGAGGCACCTGATGTGGATGCTGGGAATTGAACTCAGGACCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGGCACCTGATGTGGATGCTGGGAATTGAACTCAGGACCTCT  750

seq1  GGAAGAGCAGT-AAGTGCTCTTAACCACTGCACCATCTCTCCAGCTGCCA  798
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTAAAGTGCTCTTAACCACTGCACCATCTCTCCAGCTGCCA  800

seq1  GGTGTTAGTTATCGTCATT--AAAATTATATTATCATTCAGCT-AATAAG  845
      |||||||||||||||||||  ||| |||||||||||||||||| ||||||
seq2  GGTGTTAGTTATCGTCATTTAAAATTTATATTATCATTCAGCTAAATAAG  850

seq1  CTGGCTCT-CTAGGTAAAGGTGCA-TGCTGCCAAGCCTGACGGCCTG-AG  892
      |||||||| ||||||||||||||| ||||| ||||||||||| |||| ||
seq2  CTGGCTCTCCTAGGTAAAGGTGCATTGCTGGCAAGCCTGACGCCCTGAAG  900

seq1  TTCTCCT-CCTGGGA--CCCCTGTAGTGGAGGGAAAGGGCCAA-CTTCTC  938
      ||||||| |||||||  ||| ||||||||| |||||||||||| ||||||
seq2  TTCTCCTCCCTGGGAACCCCTTGTAGTGGA-GGAAAGGGCCAACCTTCTC  949

seq1  AAG-CTGCCCTC-TGCCCTCCCACA-CCCGCG-CTGTGGATGTG-CACCC  983
      ||| |||||||| |||||||||||| |||||| ||||||||||| |||||
seq2  AAGCCTGCCCTCTTGCCCTCCCACACCCCGCGTCTGTGGATGTGCCACCC  999

seq1  TCCCCCCAGATAAATAAGTGC-TTTTGTTT  1012
      |||||| |||| ||| ||||| ||||||||
seq2  TCCCCCAAGATTAATTAGTGCTTTTTGTTT  1029