BAC Information

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BAC

Clone NameB6Ng01-343M07
Chromosome15 (Build37)
Map Location 71,016,368 - 71,017,533
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343M07.bB6Ng01-343M07.g
ACCGA126463GA126464
length4941,154
definitionB6Ng01-343M07.b B6Ng01-343M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcatgtggaatttatgggataacttaaatatactatcatatcatctgcaa
atagtgatattttgacttcttcctttctaatctgtatccctttcacctcc
atttgttgtctaattgctctaggtagtacttgaagtactatgttgaatag
gtagggagggagtggcagccttgtatagtccctgattttagtgggattgt
ttcaaatttctctccatttagtttgatgttgtgtacttattttctgtata
ttgcttttactatgtttaggaatgggccttgaattcctgatctttccaag
acttttatcatgaagggctgttggattttgtcaaatgcgtactcagcatc
taatgaaatgattatatgaatatgaactaaccagtacccgggagctcttg
tctttagctgcatatgtatcaaaagatggcctaggcggccatcactgcaa
agagaggcccattggacttgcaaactttatatgccccagtacag
gaattctcttcagagggtagagtcacgagagtctgagctagctctaaagg
tcacagagaaaacagtgtaatggtagtaaatattctataaggctgagtga
ctgattttattttggtgattggggaaagttgactgttacaaatttggggt
taatttttcttgggctatctgtaattctcttaatagccattcattgctta
ctgtgtctgtgtctgactcaaaattctagttatcaccagctaaacctttt
tttttttaattttatgtatatgtgtacgttgtagatgtctttagaagcac
cagaagaggacactgtcttccattacagatggttgtgagccaccatgtgg
ttggtgggaattgtactcagaagttatggaagagcagccagtgttcttaa
ccactgagccatctcttcagtccagctaaaactttttcaaatgaattaat
ttaactgatcataaatttccaccaactcaaactaagaacataatcagaaa
gcaagtgaaacttcaggcaggaatttctcttctttgctttaactgggcct
gccttatctttccaccaatgccattgaaaaaaggctttcccagggaaact
tcctctgtggttccgtggtcaggaaagaatactccttccccaataacaac
cctcaagtttctcaaagaaatttctactcaggcctgttttccaaggtggc
cccaaaccagggtggactagaattttccttgttgaacattgcaatagaaa
cccaatgggatttgacaacttgcacagatcttaacagcatcctaactaga
actgaattttgcctttattatttttaaaggaaagttttgtaaatttcaaa
gaagaaaaagaaaaaaagggttttgatttctgacattattttcttttctg
taatgaaaaaaactgatgagccaggaggtggctcacacataaggtcatga
gcttgatacccaaaacccacattatggaggatatattgatttatggaagt
tatcatctgacgtcatgtatgtgagtatatgaacaagaacactcattcat
acacataatactaataataacctaacttcaggagactgtttccacttcgg
tacatgaattttagcaactggaatctttggtgccaagactgatgggccgc
tgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71016368_71017533
seq2: B6Ng01-343M07.g_68_1221

seq1  GAATTCTCTTCAGAGGGTAGAGTCACGAGAGTCTGAGCTAGCTCTAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCAGAGGGTAGAGTCACGAGAGTCTGAGCTAGCTCTAAAGG  50

seq1  TCACAGAGAAAACAGTGTAATGGTAGTAAATATTCTATAAGGCTGAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGAAAACAGTGTAATGGTAGTAAATATTCTATAAGGCTGAGTGA  100

seq1  CTGATTTTATTTTGGTGATTGGGGAAAGTTGACTGTTACAAATTTGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTATTTTGGTGATTGGGGAAAGTTGACTGTTACAAATTTGGGGT  150

seq1  TAATTTTTCTTGGGCTATCTGTAATTCTCTTAATAGCCATTCATTGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCTTGGGCTATCTGTAATTCTCTTAATAGCCATTCATTGCTTA  200

seq1  CTGTGTCTGTGTCTGACTCAAAATTCTAGTTATCACCAGCTAAACCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTGTGTCTGACTCAAAATTCTAGTTATCACCAGCTAAACCTTTT  250

seq1  TTTTTTTAATTTTATGTATATGTGTACGTTGTAGATGTCTTTAGAAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTTATGTATATGTGTACGTTGTAGATGTCTTTAGAAGCAC  300

seq1  CAGAAGAGGACACTGTCTTCCATTACAGATGGTTGTGAGCCACCATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGACACTGTCTTCCATTACAGATGGTTGTGAGCCACCATGTGG  350

seq1  TTGGTGGGAATTGTACTCAGAAGTTATGGAAGAGCAGCCAGTGTTCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGAATTGTACTCAGAAGTTATGGAAGAGCAGCCAGTGTTCTTAA  400

seq1  CCACTGAGCCATCTCTTCAGTCCAGCTAAAACTTTTTCAAATGAATTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCCATCTCTTCAGTCCAGCTAAAACTTTTTCAAATGAATTAAT  450

seq1  TTAACTGATCATAAATTTCCACCAACTCAAACTAAGAACATAATCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGATCATAAATTTCCACCAACTCAAACTAAGAACATAATCAGAAA  500

seq1  GCAAGTGAAACTTCAGGCAGGAATTTCTCTTCTTTGCTTTAACTGGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGAAACTTCAGGCAGGAATTTCTCTTCTTTGCTTTAACTGGGCCT  550

seq1  GCCTTATCTTTCCACCAATGCCATTGAAAAAAGGCTTTCCCAGGGAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATCTTTCCACCAATGCCATTGAAAAAAGGCTTTCCCAGGGAAACT  600

seq1  TCCTCTGTGGTTCCGTGGTCAGGAAAGAATACTCCTTCCCCAATAACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGGTTCCGTGGTCAGGAAAGAATACTCCTTCCCCAATAACAAC  650

seq1  CCTCAAGTTTCTCAAAGAAATTTCTACTCAGGCCTGTTTTCCAAGGTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGTTTCTCAAAGAAATTTCTACTCAGGCCTGTTTTCCAAGGTGGC  700

seq1  CCCAAACCAGGGTGGACTAGAATTTTCCTTGTTGAACATTGCAATAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACCAGGGTGGACTAGAATTTTCCTTGTTGAACATTGCAATAGAAA  750

seq1  CCCAATGGGATTTGACAACTTGCACAGATCTTAACAGCATCCTAACTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGGATTTGACAACTTGCACAGATCTTAACAGCATCCTAACTAGA  800

seq1  ACTGAATTTTGCCTTTATTATTTTTAAAGGAAAGTTTTGTAAATTTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTTTGCCTTTATTATTTTTAAAGGAAAGTTTTGTAAATTTCAAA  850

seq1  GAAGAAAAAGAAAAAAAGGGTTTTGATTTCTGACATTATTTTCTTTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAGAAAAAAAGGGTTTTGATTTCTGACATTATTTTCTTTTCTG  900

seq1  TAATGAAAAAAACTGATGAGCCAGGGAGGTGGCTCAACACATAAGGTCAT  950
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  TAATGAAAAAAACTGATGAGCCA-GGAGGTGGCTC-ACACATAAGGTCAT  948

seq1  GAGCTTGATACCCAAAACCCACATTATGGAAGGATATAATTGATTTATGG  1000
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  GAGCTTGATACCCAAAACCCACATTATGG-AGGATAT-ATTGATTTATGG  996

seq1  AAGTTATCATCTGACGTCCATGTATGTTGAGGTATATGAACA--GACACT  1048
      ||||||||||||||||| |||||||| ||| |||||||||||   |||||
seq2  AAGTTATCATCTGACGT-CATGTATG-TGA-GTATATGAACAAGAACACT  1043

seq1  CATTCATACACAAATAAATACATAAATAATAACATAACTTCAGGAGACTG  1098
      ||||||||||||    |||||   ||||||||| ||||||||||||||||
seq2  CATTCATACACA---TAATAC--TAATAATAACCTAACTTCAGGAGACTG  1088

seq1  TTTCCACTTCGTACCATGATTTTTAGGCAACCTGAATC-TTGTTGCCAAG  1147
      |||||||||||   ||||| ||||| |||||  ||||| ||| |||||||
seq2  TTTCCACTTCGGTACATGAATTTTA-GCAACTGGAATCTTTGGTGCCAAG  1137

seq1  AC--ATGGGTATGGCGCTGCG  1166
      ||  ||||    | |||||||
seq2  ACTGATGG----GCCGCTGCG  1154