BAC Information

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BAC

Clone NameB6Ng01-343N12
Chromosome15 (Build37)
Map Location 10,320,170 - 10,320,908
singlet/doubletsinglet
Overlap geneAgxt2
Upstream geneLOC383094, Capsl, Il7r, C230086A09Rik, Prlr
Downstream gene4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343N12.bB6Ng01-343N12.g
ACCGA126511GA126512
length1,208926
definitionB6Ng01-343N12.b B6Ng01-343N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagagatctgcttgtttctgcctctcccagtgctgtacttataa
gcatgactcttttcaaaatgcctccctttaaccccattaaaaatggggct
cagaactgaacaaagaattctcacctgaggaataccgaatggcagagaag
cacttgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaa
aacaaccctgagattccacctcacaccagtcagaatggctaagatcaaaa
attcaggtgacagcagatgctggcgaggatgtggagaaagaggaacactc
ctccattgttggtgggagtgcaggcttgtacaaccactctggaaatcagt
ctggcggttcctcagaaaactggacatagtactaccggaggatccagcaa
tacctctcctgggcatatatccagaagatgccccaacaggtaagaaggac
acatgctccactatgttcatagcagccttatttataatagccagaagctg
gaaagaacctagatgcccctcaacagaggaatggatacagaaaatgtggt
acatctacacaatggagtactactcagctattaaaaagaatgaatttatg
aaattcctagccaaatggatggacctggagggcatcatcctgagtgaggt
aacacattcacaaagaaactcacacaatatgtattcactgataagtggat
attagccccaaacctaggatacccaagatataagatataatttgctaaac
acatgaaactcaaggagaatgaagactgaagtgtggacactatgcccctc
cttagatttgggaacaaaacacccatggaaggagttacagagacggagtt
tggagctgagatgaaaggatggaccatgtagagactgccatagccaggga
tccaccccataatcagcatccaaacgctgacaccattgcatacactagca
agattttattgaaaggacgcagatgtagctgtctctgtgagactatgccg
gggcccagcaaaacaaggaagtgatgctcacagtcagctaatgatggatc
aataggctccaatggaggagctagagaaggtagccagagctaaaggaatc
tgcaactatagggtgaacactatgagctacggtacccaggaaccttgacc
ttagctgtcataatattcaaagaatgtgcctaggtcgggcccacatacat
agcgttga
gaattcttaatagacaccgtgattcttaatttcagtgactgcataagcaa
tggcagagtatgaaggggtattcttagaatatagtttctttgctttgcct
aacaataaaagctgtgattcattggtacttcctgtcagctgtctttgtgg
gtgtgtggagtgagtgggtagagtgtgttcccagcccttcactgccacag
ccccagctgtgccactccctcctgtgagtccttcatccctgttgacacta
ggatgtatggactacagaatgattcgatgtcctactgtgcacctgtccct
atgaaactcgtgattctcaagcaactgattgtattttttcctgcacaatt
ttgtgtattgtccaggaaatgttctgtttcactatatgtgccatttttat
gccacttagatagatgaagaggagaaagaacacaggatgaaagaaaaact
atatgaaattcctacattgtttcatttgggtctgttaatctggtctattg
ctaggaagtaagacttggccattcagcccaggtctgccagacttgcacat
ttcagatcttctgctatattggtctctgtcacctaagaataacttctgaa
atcagcccctctcctataccagtcacaatcacctaatgacaaccaagaac
cctgtttacagcaacctggaataaggataaatgagaagaaattctttgaa
agaaactttggtctgatatgcatctaagactgggcatcatgtctccatca
caccttgccatgtggtttctgtgtagagagagaccaggctgacacagaga
cagataacaagaaatgctcttatcttggagatgtccatgacatcctttct
gtcatggtttcttttccttcttcaaatattaagaatcctacttcagtata
taggtgttaggggtgtgatgaaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_10320170_10320908
seq2: B6Ng01-343N12.g_246_993

seq1  TCCCAGCCCTTCACTGCCACAGCCCCAGCTGTGCCACTCCCTCCTGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCCTTCACTGCCACAGCCCCAGCTGTGCCACTCCCTCCTGTGAG  50

seq1  TCCTTCATCCCTGTTGACACTAGGATGTATGGACTACAGAATGATTCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATCCCTGTTGACACTAGGATGTATGGACTACAGAATGATTCGAT  100

seq1  GTCCTACTGTGCACCTGTCCCTATGAAACTCGTGATTCTCAAGCAACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTACTGTGCACCTGTCCCTATGAAACTCGTGATTCTCAAGCAACTGA  150

seq1  TTGTATTTTTTCCTGCACAATTTTGTGTATTGTCCAGGAAATGTTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTTTCCTGCACAATTTTGTGTATTGTCCAGGAAATGTTCTGTT  200

seq1  TCACTATATGTGCCATTTTTATGCCACTTAGATAGATGAAGAGGAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATATGTGCCATTTTTATGCCACTTAGATAGATGAAGAGGAGAAAG  250

seq1  AACACAGGATGAAAGAAAAACTATATGAAATTCCTACATTGTTTCATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGATGAAAGAAAAACTATATGAAATTCCTACATTGTTTCATTTG  300

seq1  GGTCTGTTAATCTGGTCTATTGCTAGGAAGTAAGACTTGGCCATTCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTAATCTGGTCTATTGCTAGGAAGTAAGACTTGGCCATTCAGCC  350

seq1  CAGGTCTGCCAGACTTGCACATTTCAGATCTTCTGCTATATTGGTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGCCAGACTTGCACATTTCAGATCTTCTGCTATATTGGTCTCTG  400

seq1  TCACCTAAGAATAACTTCTGAAATCAGCCCCTCTCCTATACCAGTCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAGAATAACTTCTGAAATCAGCCCCTCTCCTATACCAGTCACAA  450

seq1  TCACCTAATGACAACCAAGAA-CCTGTTTACAGCAACCTGGAATAAGGAT  499
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCACCTAATGACAACCAAGAACCCTGTTTACAGCAACCTGGAATAAGGAT  500

seq1  AAATGAGAAGAAATTCTTTGAAAGAAAC-TTGGTCTGATATGCATCTAAG  548
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAATGAGAAGAAATTCTTTGAAAGAAACTTTGGTCTGATATGCATCTAAG  550

seq1  ACTGGGCATCATGTCTCCATCACACCTTGCCATGTGG-TTCTGTGTAGAG  597
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTGGGCATCATGTCTCCATCACACCTTGCCATGTGGTTTCTGTGTAGAG  600

seq1  AGAGA-CAGGCTGACACAGAGACAGAGAACAAGAAAGGCTCTTATC-TGG  645
      ||||| |||||||||||||||||||| ||||||||| ||||||||| |||
seq2  AGAGACCAGGCTGACACAGAGACAGATAACAAGAAATGCTCTTATCTTGG  650

seq1  AGATGTCCATGACAT-CTTTCTGTCATGGTTTC-TTTCCTTCTTCAAATA  693
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  AGATGTCCATGACATCCTTTCTGTCATGGTTTCTTTTCCTTCTTCAAATA  700

seq1  TTAAGAAT-CTAACTCAGTAGATAGGTG-TAGGGGTGTGATGAAATGG  739
      |||||||| |||  |||||| ||||||| |||||||||||||||||||
seq2  TTAAGAATCCTACTTCAGTATATAGGTGTTAGGGGTGTGATGAAATGG  748