BAC Information

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BAC

Clone NameB6Ng01-344C21
Chromosome15 (Build37)
Map Location 55,416,527 - 55,417,086
singlet/doubletsinglet
Overlap geneMtbp
Upstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13
Downstream geneSntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344C21.bB6Ng01-344C21.g
ACCGA126751GA126752
length5601,152
definitionB6Ng01-344C21.b B6Ng01-344C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaaacagagcctgtagaaagttgcttttctgttctattttc
ctatgatcggttgagtggtttatgcttataagtgtcagtttgaagaaatg
gaagggatgtggtacaggcagatctttggaggtaagtggctgggcagttt
agcgggttggagagctccaggttcagtgggaaactctgtgccaaaatagt
gtggagcacggaactcaagaagaagaagaccatagtgtggatacttctat
ccatcttagaagagggaacaaaacacccatggaaggagttacagagacag
tgtgtggagtagagactgaagaaatgaccatctagagactgactcacccg
gggatccattgcatttacaatcaccaaacccagacactgttgtggatgcc
aacaagtgcttgctgacaggagcctgacatagctgtctcctgagaggttc
tgccagtgcctcacacatacagaggtggatgctcacagccatccattgga
ctgagcataggatccccaatgaaggagctagagaaagaactcaaggagct
gaagggcttt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcctccc
aatggaggagctagagaaagtacccagagctaaagggatctgcacctata
gtgaacaacatatgactaaccagtaccctgagctctgactctagctgcat
atgtatcaaagatgctagtcgtcatcactgagagagccatgacccgcaaa
ctagtgccgttacagtaacgccagtcaatggggaatgtgtttgctatagg
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55416527_55417086
seq2: B6Ng01-344C21.b_47_606

seq1  GAATTCAGAGAAACAGAGCCTGTAGAAAGTTGCTTTTCTGTTCTATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAACAGAGCCTGTAGAAAGTTGCTTTTCTGTTCTATTTTC  50

seq1  CTATGATCGGTTGAGTGGTTTATGCTTATAAGTGTCAGTTTGAAGAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATCGGTTGAGTGGTTTATGCTTATAAGTGTCAGTTTGAAGAAATG  100

seq1  GAAGGGATGTGGTACAGGCAGATCTTTGGAGGTAAGTGGCTGGGCAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATGTGGTACAGGCAGATCTTTGGAGGTAAGTGGCTGGGCAGTTT  150

seq1  AGCGGGTTGGAGAGCTCCAGGTTCAGTGGGAAACTCTGTGCCAAAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGTTGGAGAGCTCCAGGTTCAGTGGGAAACTCTGTGCCAAAATAGT  200

seq1  GTGGAGCACGGAACTCAAGAAGAAGAAGACCATAGTGTGGATACTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCACGGAACTCAAGAAGAAGAAGACCATAGTGTGGATACTTCTAT  250

seq1  CCATCTTAGAAGAGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTAGAAGAGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAG  300

seq1  TGTGTGGAGTAGAGACTGAAGAAATGACCATCTAGAGACTGACTCACCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGAGTAGAGACTGAAGAAATGACCATCTAGAGACTGACTCACCCG  350

seq1  GGGATCCATTGCATTTACAATCACCAAACCCAGACACTGTTGTGGATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCATTGCATTTACAATCACCAAACCCAGACACTGTTGTGGATGCC  400

seq1  AACAAGTGCTTGCTGACAGGAGCCTGACATAGCTGTCTCCTGAGAGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTGCTTGCTGACAGGAGCCTGACATAGCTGTCTCCTGAGAGGTTC  450

seq1  TGCCAGTGCCTCACACATACAGAGGTGGATGCTCACAGCCATCCATTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTGCCTCACACATACAGAGGTGGATGCTCACAGCCATCCATTGGA  500

seq1  CTGAGCATAGGATCCCCAATGAAGGAGCTAGAGAAAGAACTCAAGGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCATAGGATCCCCAATGAAGGAGCTAGAGAAAGAACTCAAGGAGCT  550

seq1  GAAGGGCTTT  560
      ||||||||||
seq2  GAAGGGCTTT  560


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