BAC Information

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BAC

Clone NameB6Ng01-344N14
Chromosome15 (Build37)
Map Location 39,269,680 - 39,270,874
singlet/doubletsinglet
Overlap geneRims2
Upstream geneAzin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215
Downstream geneTm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N14.bB6Ng01-344N14.g
ACCGA127229GA127230
length1,186104
definitionB6Ng01-344N14.b B6Ng01-344N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgcttattacagttgattatatcaaaaaaaataaaataaaa
aagaaaaggactgactatcaaacatgacaaattaggagaaaggagaagca
ggggctgacatgaaaaattcatgtatactcaccagtctgatatatttacc
atatagcaaaataaattccagaaaaaaacacaggttaatggctaaaaata
attttaaaaagaaaatatatagctaactatttaatagatttgaagatgaa
taagaaagtatctaaggatgggcataatgagaataaaaacaaacaaagaa
aattgtagctgtactaagcatgctactcccaaatgatcaaaaaaattaat
agaccagcatctaaataagaaataaagttaatgaaataatagttagatgg
gaaaatcttattttaaaacaatttttataaattgataaaagaaaactatt
aaaaatccagaaggaagtgaacagagagaatcaaggggcgagggataact
tgtgagatgatgaatgttacacatccatatcacaatggaactatgtaaca
ttcagatcatgagataaacagtatttttgaggccttttcaatagacaaaa
aaattggtgctatgaatccaaaagttcaagcatccaggataagagtgaaa
aaaaaatgttaacctttctggaaagcaactctaaaatatgaattaaagct
ataaaacttcaaacttcaaacatacacacatatacacacaatcagatatg
tataggcaaaattatacataaaaataagcattgaaaagaaatttctatac
ttcaaagaaatatttagttagtgatagattcctatgatagaacaacagtg
tagtcatttaaatttctaaagaatattaaatgattgaaagtaatgataca
atgatagcaattgaaaagggatacaaaaggatacagtgtgatattaaatt
tataaatttgaagacttctacattgagagaaaaaggttgaaacctaagca
taacagccaattctttctcaggaaaggatatagtgaaatttcattccttc
caaatacctgagcatgtttcaattgttctattcaaacgcatcctagtttt
cagagcatgtaaatgttattttccaaactagactatagtatgggtaacta
tgcctatgaactctacgatgtgaaccctcagtaaaa
gaattctttgttttttaaatagggttgtttgattttctgaagtcaaggtt
cttgagttctttgtattaaggaaaagtaattgttgcttcctgttattttt
gttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_39269680_39270874
seq2: B6Ng01-344N14.b_49_1234 (reverse)

seq1  TTTTACTGAGGGTTTCTACATCCTTAGATGTCATA-GCATAGTTACACAT  49
      ||||||||||||||   |||| | ||||  ||||| |||||||||| |||
seq2  TTTTACTGAGGGTT--CACAT-CGTAGAGTTCATAGGCATAGTTACCCAT  47

seq1  ACTTAATAGTTCTAGTTTTGAAAATAACAATTTTACATTTCTCTGAAAAA  99
      |||  |||| |||||||| ||||||||||  |||||| | ||||| ||||
seq2  ACT--ATAG-TCTAGTTTGGAAAATAACA--TTTACA-TGCTCTG-AAAA  90

seq1  CTAGGAATGCGTTTGAAATAGAACATTTGAAACATTGCTCAGGTATTT-G  148
      ||||| ||||||||| ||||||||| |||||||| ||||||||||||| |
seq2  CTAGG-ATGCGTTTG-AATAGAACAATTGAAACA-TGCTCAGGTATTTGG  137

seq1  AAGGAATGAAATTTCACTATATCCCTTTCCTGAGAAAGAATT-GCTGTTA  197
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  AAGGAATGAAATTTCACTATAT-CCTTTCCTGAGAAAGAATTGGCTGTTA  186

seq1  TGCTTAGGTTTCAACC-TTTTCTCTCAATGTAG-AGTCTTCAAATTTATA  245
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TGCTTAGGTTTCAACCTTTTTCTCTCAATGTAGAAGTCTTCAAATTTATA  236

seq1  AATTTAATATCACACTGTATCCTTTTGTATCCCTTTTCAATTGCTATCAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATATCACACTGTATCCTTTTGTATCCCTTTTCAATTGCTATCAT  286

seq1  TGTATCATTACTTTCAATCATTTAATATTCTTTAGAAATTTAAATGACTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATTACTTTCAATCATTTAATATTCTTTAGAAATTTAAATGACTA  336

seq1  CACTGTTGTTCTATCATAGGAATCTATCACTAACTAAATATTTCTTTGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTGTTCTATCATAGGAATCTATCACTAACTAAATATTTCTTTGAA  386

seq1  GTATAGAAATTTCTTTTCAATGCTTATTTTTATGTATAATTTTGCCTATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAAATTTCTTTTCAATGCTTATTTTTATGTATAATTTTGCCTATA  436

seq1  CATATCTGATTGTGTGTATATGTGTGTATGTTTGAAGTTTGAAGTTTTAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGATTGTGTGTATATGTGTGTATGTTTGAAGTTTGAAGTTTTAT  486

seq1  AGCTTTAATTCATATTTTAGAGTTGCTTTCCAGAAAGGTTAACATTTTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAATTCATATTTTAGAGTTGCTTTCCAGAAAGGTTAACATTTTTT  536

seq1  TTTCACTCTTATCCTGGATGCTTGAACTTTTGGATTCATAGCACCAATTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCTTATCCTGGATGCTTGAACTTTTGGATTCATAGCACCAATTT  586

seq1  TTTTGTCTATTGAAAAGGCCTCAAAAATACTGTTTATCTCATGATCTGAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTATTGAAAAGGCCTCAAAAATACTGTTTATCTCATGATCTGAA  636

seq1  TGTTACATAGTTCCATTGTGATATGGATGTGTAACATTCATCATCTCACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATAGTTCCATTGTGATATGGATGTGTAACATTCATCATCTCACA  686

seq1  AGTTATCCCTCGCCCCTTGATTCTCTCTGTTCACTTCCTTCTGGATTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCCCTCGCCCCTTGATTCTCTCTGTTCACTTCCTTCTGGATTTTT  736

seq1  AATAGTTTTCTTTTATCAATTTATAAAAATTGTTTTAAAATAAGATTTTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTCTTTTATCAATTTATAAAAATTGTTTTAAAATAAGATTTTC  786

seq1  CCATCTAACTATTATTTCATTAACTTTATTTCTTATTTAGATGCTGGTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAACTATTATTTCATTAACTTTATTTCTTATTTAGATGCTGGTCT  836

seq1  ATTAATTTTTTTGATCATTTGGGAGTAGCATGCTTAGTACAGCTACAATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTTTTGATCATTTGGGAGTAGCATGCTTAGTACAGCTACAATT  886

seq1  TTCTTTGTTTGTTTTTATTCTCATTATGCCCATCCTTAGATACTTTCTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTTGTTTTTATTCTCATTATGCCCATCCTTAGATACTTTCTTA  936

seq1  TTCATCTTCAAATCTATTAAATAGTTAGCTATATATTTTCTTTTTAAAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTCAAATCTATTAAATAGTTAGCTATATATTTTCTTTTTAAAAT  986

seq1  TATTTTTAGCCATTAACCTGTGTTTTTTTCTGGAATTTATTTTGCTATAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGCCATTAACCTGTGTTTTTTTCTGGAATTTATTTTGCTATAT  1036

seq1  GGTAAATATATCAGACTGGTGAGTATACATGAATTTTTCATGTCAGCCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATATATCAGACTGGTGAGTATACATGAATTTTTCATGTCAGCCCC  1086

seq1  TGCTTCTCCTTTCTCCTAATTTGTCATGTTTGATAGTCAGTCCTTTTCTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCCTTTCTCCTAATTTGTCATGTTTGATAGTCAGTCCTTTTCTT  1136

seq1  TTTTATTTTATTTTTTTTGATATAATCAACTGTAATAAGCAGAGGAATTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATTTTTTTTGATATAATCAACTGTAATAAGCAGAGGAATTC  1186