BAC Information

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BAC

Clone NameB6Ng01-345I23
Chromosome15 (Build37)
Map Location 89,644,191 - 89,786,084
singlet/doubletdoublet
Overlap geneSyt10
Upstream geneAlg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575
Downstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345I23.bB6Ng01-345I23.g
ACCGA127714GA127715
length1,1401,129
definitionB6Ng01-345I23.b B6Ng01-345I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,644,191 - 89,645,332)(89,784,967 - 89,786,084)
sequence
gaattcagcatcgcttatggagaaactgacgctgggaattggttacaagt
aagtattatggacaagaaaagtctccccatctggagtagcatgtaaaagc
tactttgctgggtgtgcacctgataatgttaccgatgccaaattaagatc
ccaagttctattgctatgtaatcaaatgccacctttgcagaaacttagag
tttaagttctacggctctatagaatttattctaatcatgtgggcaatgat
tggtcttaaatatcaccagcggtcaaagagaagttggaaggtatgttact
tactgtggtagcacagtggatatctttccatactgtggcttccctggaga
gatcagagacttcaaataaattatcaagaatcacttccccaatcatgtcg
tgtctggaaaatctgtcaaaatcatatatactaaagtgtagtttgcggtt
gcttagctgatcgtaaaccaccggaaactgaaatagctcatcaaacagag
ggtttaaagtcttccggtgcacgcgggtctgaaatttcttcttcctatcc
ggaagaagatagatcttcacataaggatcagaagttcctgtgaaatcttt
agctgggagatctaaagctttgataattttaacaactaggagttcatttt
cataatcatactggagcgcaaagttaagtttcccacaggtcttgacgtcg
tcttttctgttgccctcggagtcaaccgatttctgcttgtagagttctgg
ttttatcctcccgatgctcgttctcgtttctcctctttgtaagatgggtt
cagtgcccacgctaaagtcgacgctggagacattcatttgccttggtagg
tgtctcctgaaggagttgtggctgtacacacacatacacacatacacaag
atcgtttaggttagtcatttctgaggtagctttgggactggtatatacat
gctccccacccactaggatcaggagaaaagtgtcattgtccttgggcaga
ttcctatgcctatgtctgtgtcagcatggaaaaccagaatgacagctgtc
aaggaaaagtctaaaactgataatcgaaacacacagatgtttcagtgtgt
aaggagggttttgctgattccctcataatcagattcttaa
gaattccacctagccactgttccccaaaccacaaagctcccctgcttttg
cttcttcctgaaagaccccttccggctttttttaggcaactttgttttga
gtaaaaggtttcctttcacgctgtttcacacaattgccaaaaatgtctat
gtagaagaatgattctggtgtcaggaggagcaccccttctgaggttcacc
cgcttctctctgtcacctgaaattacagcgcttccaatttattctgattc
actctgcctgtgtgaaacacatttggggaccttcaccattccaaccagat
gagcaatcactatttcaaatgaaaacatctcccttcggaggctttctact
gctgttaaccttcaacttgctgaattagtctgactctgtagtcaaagtgg
gaaagctaaaaaccattagcttgaagtcagcccaagagtccgggtctgag
tttgatattaactgcaggttgtgatggaaaactgaaaagaagttgtttct
gtggagacagattggctgattaggatttcagtgctgtggagagattggga
tgttggaggtccagaggctactcatcctatcttgggctagttctagctct
ctagagctatgtctctcctatgtggtcctcataacaaaagacccagaatg
attctcacctgcttccctatgtcttcttatggagagctttgcaatccaat
acctttatgttgtcagtaattaaattcttgctgtgttcacctcttcattt
gcactactctaagattataattaaaagtgcaacatttggttatttaaaat
atcagtttcaatcaagagcaagcccattgggcgttagcctcaggattcag
tcatattagtcatcttagttgacttcagccattaaaattatctgcatagt
tatttgaaacaacctaaacagtggtttaacttattcatttgccttgactc
aatttggagattatagaaagttcttcctgtccacatctggtgtctgacct
aacatcttgggtgacttaaaaagatagagaattttcctgggaacctaatc
aagtttccttgactcactggccttcacgaatataaaccggtaaggatggt
cctctagcgtgtcttgagaccaatgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89644191_89645332
seq2: B6Ng01-345I23.b_44_1183

seq1  GAATTCAGCATCGCTTATGGAGAAACTGACGCTGGGAATTGGTTACAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCGCTTATGGAGAAACTGACGCTGGGAATTGGTTACAAGT  50

seq1  AAGTATTATGGACAAGAAAAGTCTCCCCATCTGGAGTAGCATGTAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTATGGACAAGAAAAGTCTCCCCATCTGGAGTAGCATGTAAAAGC  100

seq1  TACTTTGCTGGGTGTGCACCTGATAATGTTACCGATGCCAAATTAAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGCTGGGTGTGCACCTGATAATGTTACCGATGCCAAATTAAGATC  150

seq1  CCAAGTTCTATTGCTATGTAATCAAATGCCACCTTTGCAGAAACTTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTCTATTGCTATGTAATCAAATGCCACCTTTGCAGAAACTTAGAG  200

seq1  TTTAAGTTCTACGGCTCTATAGAATTTATTCTAATCATGTGGGCAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTCTACGGCTCTATAGAATTTATTCTAATCATGTGGGCAATGAT  250

seq1  TGGTCTTAAATATCACCAGCGGTCAAAGAGAAGTTGGAAGGTATGTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTAAATATCACCAGCGGTCAAAGAGAAGTTGGAAGGTATGTTACT  300

seq1  TACTGTGGTAGCACAGTGGATATCTTTCCATACTGTGGCTTCCCTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGTAGCACAGTGGATATCTTTCCATACTGTGGCTTCCCTGGAGA  350

seq1  GATCAGAGACTTCAAATAAATTATCAAGAATCACTTCCCCAATCATGTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAGACTTCAAATAAATTATCAAGAATCACTTCCCCAATCATGTCG  400

seq1  TGTCTGGAAAATCTGTCAAAATCATATATACTAAAGTGTAGTTTGCGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGAAAATCTGTCAAAATCATATATACTAAAGTGTAGTTTGCGGTT  450

seq1  GCTTAGCTGATCGTAAACCACCGGAAACTGAAATAGCTCATCAAACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCTGATCGTAAACCACCGGAAACTGAAATAGCTCATCAAACAGAG  500

seq1  GGTTTAAAGTCTTCCGGTGCACGCGGGTCTGAAATTTCTTCTTCCTATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAAGTCTTCCGGTGCACGCGGGTCTGAAATTTCTTCTTCCTATCC  550

seq1  GGAAGAAGATAGATCTTCACATAAGGATCAGAAGTTCCTGTGAAATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGATAGATCTTCACATAAGGATCAGAAGTTCCTGTGAAATCTTT  600

seq1  AGCTGGGAGATCTAAAGCTTTGATAATTTTAACAACTAGGAGTTCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAGATCTAAAGCTTTGATAATTTTAACAACTAGGAGTTCATTTT  650

seq1  CATAATCATACTGGAGCGCAAAGTTAAGTTTCCCACAGGTCTTGACGTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCATACTGGAGCGCAAAGTTAAGTTTCCCACAGGTCTTGACGTCG  700

seq1  TCTTTTCTGTTGCCCTCGGAGTCAACCGATTTCTGCTTGTAGAGTTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGTTGCCCTCGGAGTCAACCGATTTCTGCTTGTAGAGTTCTGG  750

seq1  TTTTATCCTCCCGATGCTCGTTCTCGTTTCTCCTCTTTGTAAGATGGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCCTCCCGATGCTCGTTCTCGTTTCTCCTCTTTGTAAGATGGGTT  800

seq1  CAGTGCCCACGCTAAAGTCGACGCTGGAGACATTCATTTGCCTTGGTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCACGCTAAAGTCGACGCTGGAGACATTCATTTGCCTTGGTAGG  850

seq1  TGTCTCCTGAAGGAGTTGTGGCTGTACACACACATACACACATACACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTGAAGGAGTTGTGGCTGTACACACACATACACACATACACAAG  900

seq1  ATCGTTTAGGTTAGTCATTTCTGAGGTAGCTTTGGGACTGGTATATACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTAGGTTAGTCATTTCTGAGGTAGCTTTGGGACTGGTATATACAT  950

seq1  GCTCCCCACCCACTAGGATCAGGAGAAAAGTGTCATTGTCCTTGGGCAGG  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCCCCACCCACTAGGATCAGGAGAAAAGTGTCATTGTCCTTGGGCA-G  999

seq1  ATTCCTATGCCTATGTCTGTGTCAGCATGGAAAACCAGAATGACAGCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATGCCTATGTCTGTGTCAGCATGGAAAACCAGAATGACAGCTGT  1049

seq1  CAAGGAAAAAGTCTAAAAACTGATAATCGAAACACACAGATG-TTCAGTG  1099
      ||||| |||||||| ||||||||||||||||||||||||||| |||||||
seq2  CAAGG-AAAAGTCT-AAAACTGATAATCGAAACACACAGATGTTTCAGTG  1097

seq1  TGT-AGGA-GGTTTTGCTGTTTTCCCCTCATAATCAGATCCTTAA  1142
      ||| |||| |||||||||| ||  ||||||||||||||| |||||
seq2  TGTAAGGAGGGTTTTGCTGATT--CCCTCATAATCAGATTCTTAA  1140

seq1: chr15_89784967_89786084
seq2: B6Ng01-345I23.g_67_1195 (reverse)

seq1  TTCCCATATG-CTCAAGACACGCTAGGAGGA-CATTCTTA-CGTTTTATA  47
      |||||||  | |||||||||||||| ||||| ||| |||| || ||||||
seq2  TTCCCATTGGTCTCAAGACACGCTA-GAGGACCATCCTTACCGGTTTATA  49

seq1  TTGGTGAAAGCCAGTG-GTC-AGGAAAC-TGAATAGGTT-CCAGGAAA--  91
      || ||||| ||||||| ||| ||||||| ||| |||||| ||||||||  
seq2  TTCGTGAAGGCCAGTGAGTCAAGGAAACTTGATTAGGTTCCCAGGAAAAT  99

seq1  TTTCTATCTTTT--AGTCA--CAAGATGTTAGTTCAGACA-CAGATGTGG  136
      | ||||||||||  |||||  ||||||||||| ||||||| |||||||||
seq2  TCTCTATCTTTTTAAGTCACCCAAGATGTTAGGTCAGACACCAGATGTGG  149

seq1  ACAGGA--GACTTTCTAATAATCTCCAAATTGAGTACAAGGCAAATGAAT  184
      ||||||   ||||||| |||||||||||||||||| ||||||||||||||
seq2  ACAGGAAGAACTTTCT-ATAATCTCCAAATTGAGT-CAAGGCAAATGAAT  197

seq1  AAAGTTAAACAACTGTTTAGGTTTGTTTCAAATAACTATGCAGATAATTT  234
       ||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  -AAGTTAAACCACTGTTTAGG-TTGTTTCAAATAACTATGCAGATAATTT  245

seq1  TAATGGCTGAAGTCAACTAAGATGACTAATATGACTGAATCCTGAGGCTA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCTGAAGTCAACTAAGATGACTAATATGACTGAATCCTGAGGCTA  295

seq1  ACG-CCAATGGGCTTTGCTCTTGATTGAAACTGATATTTTAAATAACCAA  333
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACGCCCAATGGGC-TTGCTCTTGATTGAAACTGATATTTTAAATAACCAA  344

seq1  ATGTTGCACTTTTAATTATAATCTTAGAGTAGTGCAAATGAAGAGGTGAA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCACTTTTAATTATAATCTTAGAGTAGTGCAAATGAAGAGGTGAA  394

seq1  CACAGCAAGAATTTAATTACTGACAACATAAAGGTATTGGATTGCAAAGC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAGAATTTAATTACTGACAACATAAAGGTATTGGATTGCAAAGC  444

seq1  TCTCCATAAGAAGACATAGGGAAGCAGGTGAGAATCATTCTGGGTCTTTT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATAAGAAGACATAGGGAAGCAGGTGAGAATCATTCTGGGTCTTTT  494

seq1  GTTATGAGGACCACATAGGAGAGACATAGCTCTAGAGAGCTAGAACTAGC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAGGACCACATAGGAGAGACATAGCTCTAGAGAGCTAGAACTAGC  544

seq1  CCAAGATAGGATGAGTAGCCTCTGGACCTCCAACATCCCAATCTCTCCAC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATAGGATGAGTAGCCTCTGGACCTCCAACATCCCAATCTCTCCAC  594

seq1  AGCACTGAAATCCTAATCAGCCAATCTGTCTCCACAGAAACAACTTCTTT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAAATCCTAATCAGCCAATCTGTCTCCACAGAAACAACTTCTTT  644

seq1  TCAGTTTTCCATCACAACCTGCAGTTAATATCAAACTCAGACCCGGACTC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTCCATCACAACCTGCAGTTAATATCAAACTCAGACCCGGACTC  694

seq1  TTGGGCTGACTTCAAGCTAATGGTTTTTAGCTTTCCCACTTTGACTACAG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTGACTTCAAGCTAATGGTTTTTAGCTTTCCCACTTTGACTACAG  744

seq1  AGTCAGACTAATTCAGCAAGTTGAAGGTTAACAGCAGTAGAAAGCCTCCG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGACTAATTCAGCAAGTTGAAGGTTAACAGCAGTAGAAAGCCTCCG  794

seq1  AAGGGAGATGTTTTCATTTGAAATAGTGATTGCTCATCTGGTTGGAATGG  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGATGTTTTCATTTGAAATAGTGATTGCTCATCTGGTTGGAATGG  844

seq1  TGAAGGTCCCCAAATGTGTTTCACACAGGCAGAGTGAATCAGAATAAATT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCCCCAAATGTGTTTCACACAGGCAGAGTGAATCAGAATAAATT  894

seq1  GGAAGCGCTGTAATTTCAGGTGACAGAGAGAAGCGGGTGAACCTCAGAAG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCGCTGTAATTTCAGGTGACAGAGAGAAGCGGGTGAACCTCAGAAG  944

seq1  GGGTGCTCCTCCTGACACCAGAATCATTCTTCTACATAGACATTTTTGGC  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTCCTCCTGACACCAGAATCATTCTTCTACATAGACATTTTTGGC  994

seq1  AATTGTGTGAAACAGCGTGAAAGGAAACCTTTTACTCAAAACAAAGTTGC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTGAAACAGCGTGAAAGGAAACCTTTTACTCAAAACAAAGTTGC  1044

seq1  CTAAAAAAAGCCGGAAGGGGTCTTTCAGGAAGAAGCAAAAGCAGGGGAGC  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAAGCCGGAAGGGGTCTTTCAGGAAGAAGCAAAAGCAGGGGAGC  1094

seq1  TTTGTGGTTTGGGGAACAGTGGCTAGGTGGAATTC  1118
      |||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTTTGGGGAACAGTGGCTAGGTGGAATTC  1129