BAC Information

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BAC

Clone NameB6Ng01-345K18
Chromosome15 (Build37)
Map Location 70,146,876 - 70,255,050
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345K18.bB6Ng01-345K18.g
ACCGA127796GA127797
length1,1011,092
definitionB6Ng01-345K18.b B6Ng01-345K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,146,876 - 70,147,979)(70,253,966 - 70,255,050)
sequence
gaattcacaaacacacacacacacacacacacacacacacacacacacac
acacacacacaacctgtcatctcttcctccttctcttcttcctttcatct
catcccttgtctcattctcccacagatttcatatctatcccccaggacaa
atattgactaattgtatctcatgatcaaataagagagaatatcttcactt
cttataggtgcaaattaataatgatagctctcctgttgtagaaactggca
taaggtaagagattcataccaggagaagcaaaaagaaaatctgtaccttg
gcctttagcctctccccatcatctaattatggcaatatgaaggaggttaa
aaaaggaagatttcaccagagggtttgggatcaggggttgttaatgagat
gtcgaagtaatagagacaaatatttcgagaggtctcatgcctattaaatt
ggtatcagtttagaagaataaacttaattagcagggtaaattatctacaa
caatttaacctatcagcctcaggcatttctttaattttaacctagagtta
catacaggactgtgaatgaataggcatctgccagacttttattaaacatc
acttactttcaggttgattcctttgcttttaagctactgctctttaaagg
ttgcagaagcgtcgatagggaaatttatttatgacattttttctggttca
aaatgggtatgtctttataataatgggtttaacagtgatggaatgctaag
aacttaagcatattagtttataattaacataccaagtaacattttattgg
gaaaggttaaaatttcacctttgctcatttagtaaaaatagtatatctgt
agttttaaacccatatcatctgtgtaaatcttagagttaatcaagataaa
cacatgtttgtttatgccaggagatctgataaacagcttttgctgtactg
cctgaataatctagttttgggtctagttatgtcccgggattcactttact
tcttctgcataagagccaaacatttctttgtatcatctatgctaaatcat
tgtgttctgtgtgggaaaagtcaggtgaataaagagcattgctaccatca
c

gaattcctgcgtttttctggaaagcatagactcttccacagattgaggat
tttccttagaggtgagtagatggctcagtggttaaaagtacttgatcttc
aagaataagaacctgagttccaatccccaggacacatgtaatatgttggg
catagttgcttattgctttgtcaccagcactgggtacatgggaaaacttg
attctgaggacatgcacattcttaggcagacacattcacccatgtcctca
ggtgcatatcacagacatacatgcatatacatatatacatgcatgtgaac
acacaacacacacacacacacacacacacacaacacattggttttcttct
tctagaaagggtgaaatgtgaaataataacatgaaactgaatagaagttt
aaatagatgaaaaattctaatttcccagttctataatattattttttttt
tatttagtcatatctgtgtcttgctaaggtaaccaacaagagtattactc
tcaaaggtagatagcaaaaagaaaaagaagcacctttatctcaaggaaaa
ctgtcaagattccttcaaggtgattcaacaatatatctgacagttctggg
aagatttagtttttaccaaaggcattttcttgcttcaattttgcattggt
ctttgaaaaccaggcacctctagaaattctgaaattcctctgacttctgg
tctgtcttctatatttttccatggtttaagataaggcaattttttttagc
tcatctttcccttataataacgtgtcaaatacaatcaatagaaaatatct
caaaatattatgttttaatttgatttcttgtccctggagataaaaattta
ttagagcataggaatcatattaaaatgtctgtttcatagtttctgggtct
gaacatggtataagtcacttttgttcttctgggatcaatgctaaacacta
gaaatttccccaaatttacacaagaaggaaaagacaaagtactaagagtg
tgagataggcttgatgatgctccagtatagggaaatcagaagggtaagga
agtggcatgctggatggatgaaggaacactcctcatagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70146876_70147979
seq2: B6Ng01-345K18.b_44_1144

seq1  GAATTCACAAACACACACACACACACACACACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAACACACACACACACACACACACACACACACACACACACAC  50

seq1  ACACACACACAACCTGTCATCTCTTCCTCCTTCTCTTCTTCCTTTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAACCTGTCATCTCTTCCTCCTTCTCTTCTTCCTTTCATCT  100

seq1  CATCCCTTGTCTCATTCTCCCACAGATTTCATATCTATCCCCCAGGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTTGTCTCATTCTCCCACAGATTTCATATCTATCCCCCAGGACAA  150

seq1  ATATTGACTAATTGTATCTCATGATCAAATAAGAGAGAATATCTTCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGACTAATTGTATCTCATGATCAAATAAGAGAGAATATCTTCACTT  200

seq1  CTTATAGGTGCAAATTAATAATGATAGCTCTCCTGTTGTAGAAACTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGGTGCAAATTAATAATGATAGCTCTCCTGTTGTAGAAACTGGCA  250

seq1  TAAGGTAAGAGATTCATACCAGGAGAAGCAAAAAGAAAATCTGTACCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAAGAGATTCATACCAGGAGAAGCAAAAAGAAAATCTGTACCTTG  300

seq1  GCCTTTAGCCTCTCCCCATCATCTAATTATGGCAATATGAAGGAGGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAGCCTCTCCCCATCATCTAATTATGGCAATATGAAGGAGGTTAA  350

seq1  AAAAGGAAGATTTCACCAGAGGGTTTGGGATCAGGGGTTGTTAATGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGATTTCACCAGAGGGTTTGGGATCAGGGGTTGTTAATGAGAT  400

seq1  GTCGAAGTAATAGAGACAAATATTTCGAGAGGTCTCATGCCTATTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAGTAATAGAGACAAATATTTCGAGAGGTCTCATGCCTATTAAATT  450

seq1  GGTATCAGTTTAGAAGAATAAACTTAATTAGCAGGGTAAATTATCTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCAGTTTAGAAGAATAAACTTAATTAGCAGGGTAAATTATCTACAA  500

seq1  CAATTTAACCTATCAGCCTCAGGCATTTCTTTAATTTTAACCTAGAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAACCTATCAGCCTCAGGCATTTCTTTAATTTTAACCTAGAGTTA  550

seq1  CATACAGGACTGTGAATGAATAGGCATCTGCCAGACTTTTATTAAACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGACTGTGAATGAATAGGCATCTGCCAGACTTTTATTAAACATC  600

seq1  ACTTACTTTCAGGTTGATTCCTTTGCTTTTAAGCTACTGCTCTTTAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTTTCAGGTTGATTCCTTTGCTTTTAAGCTACTGCTCTTTAAAGG  650

seq1  TTGCAGAAGCGTCGATAGGGAAATTTATTTATGACATTTTTTCTGGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAAGCGTCGATAGGGAAATTTATTTATGACATTTTTTCTGGTTCA  700

seq1  AAATGGGTATGTCTTTATAATAATGGGTTTAACAGTGATGGAATGCTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTATGTCTTTATAATAATGGGTTTAACAGTGATGGAATGCTAAG  750

seq1  AACTTAAGCATATTAGTTTATAATTAACATACCAAGTAACATTTTATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGCATATTAGTTTATAATTAACATACCAAGTAACATTTTATTGG  800

seq1  GAAAGGTTAAAATTTCACCTTTGCTCATTTAGTAAAAATAGTATATCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTTAAAATTTCACCTTTGCTCATTTAGTAAAAATAGTATATCTGT  850

seq1  AGTTTTAAACCCATATCATCTGTGTAAATCTTAGAGTTAATCAAGATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAACCCATATCATCTGTGTAAATCTTAGAGTTAATCAAGATAAA  900

seq1  CACATGTTTGTTTATGCCAGGAGATCTGATAAACAGCTTTTGCTGTACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTTTGTTTATGCCAGGAGATCTGATAAACAGCTTTTGCTGTACTG  950

seq1  CCTGAATAATCTAGTTTTTGGTCTAGTTATGTCCCGGGATTCACTTTACT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTGAATAATCTAGTTTTGGGTCTAGTTATGTCCCGGGATTCACTTTACT  1000

seq1  TCTTCTGCATAAGGAGCCAAAACATTTCTTTGTATCATCTATGCTAAATC  1050
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  TCTTCTGCATAA-GAGCC-AAACATTTCTTTGTATCATCTATGCTAAATC  1048

seq1  ATTGTGTTCTGTGTTGGAAAAGTCCAGGTGAATAAGAGGCATTGCTACAA  1100
      |||||||||||||| |||||||| |||||||||||   |||||||||| |
seq2  ATTGTGTTCTGTGTGGGAAAAGT-CAGGTGAATAAAGAGCATTGCTACCA  1097

seq1  TCAC  1104
      ||||
seq2  TCAC  1101


seq1: chr15_70253966_70255050
seq2: B6Ng01-345K18.g_65_1156 (reverse)

seq1  GCTTCTATGAGG-GTGTTCCTCCATCCATTCAGCCATTCCCACCTCCCTA  49
      |||||||||||| |||||||| ||||||| ||||   | |||| ||| ||
seq2  GCTTCTATGAGGAGTGTTCCTTCATCCATCCAGC--ATGCCACTTCCTTA  48

seq1  CCTTTCCTTGATTTCCCTATACTGGGGCATCCATCAAGCCTATCTCACAC  99
      || |||  ||||||||||||||||| |||| |||||||||||||||||||
seq2  CCCTTC--TGATTTCCCTATACTGGAGCAT-CATCAAGCCTATCTCACAC  95

seq1  TCTTAGTACTTTGTCTTTT-CTTCTTGTGT-AATTTGGGGAAA-TTCTAG  146
      ||||||||||||||||||| |||||||||| |||||||||||| ||||||
seq2  TCTTAGTACTTTGTCTTTTCCTTCTTGTGTAAATTTGGGGAAATTTCTAG  145

seq1  TGTTTAGCATTGATCCCAG-AGAACAAAAGTGACTTATACCATGTTCAGA  195
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTTTAGCATTGATCCCAGAAGAACAAAAGTGACTTATACCATGTTCAGA  195

seq1  -CCAG-AACTATGAAACAGACATTTTAATATGATTCCTATGCTCTAATAA  243
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAACTATGAAACAGACATTTTAATATGATTCCTATGCTCTAATAA  245

seq1  ATTTTTATCTCCAGGGACAAGAAATCAAATTAAAACATAATATTTTGAGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCTCCAGGGACAAGAAATCAAATTAAAACATAATATTTTGAGA  295

seq1  TATTTTCTATTGATTGTATTTGACACGTTATTATAAGGGAAAGATGAGCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTATTGATTGTATTTGACACGTTATTATAAGGGAAAGATGAGCT  345

seq1  -AAAAAAATTGCCTTATCTTAAACCATGGAAAAATATAGAAGACAGACCA  392
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTGCCTTATCTTAAACCATGGAAAAATATAGAAGACAGACCA  395

seq1  GAAGTCAGAGGAATTTCAGAATTTCTAGAGGTGCCTGGTTTTCAAAGACC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAGGAATTTCAGAATTTCTAGAGGTGCCTGGTTTTCAAAGACC  445

seq1  AATGCAAAATTGAAGCAAGAAAATGCCTTTGGTAAAAACTAAATCTTCCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAATTGAAGCAAGAAAATGCCTTTGGTAAAAACTAAATCTTCCC  495

seq1  AGAACTGTCAGATATATTGTTGAATCACCTTGAAGGAATCTTGACAGTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTCAGATATATTGTTGAATCACCTTGAAGGAATCTTGACAGTTT  545

seq1  TCCTTGAGATAAAGGTGCTTCTTTTTCTTTTTGCTATCTACCTTTGAGAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGATAAAGGTGCTTCTTTTTCTTTTTGCTATCTACCTTTGAGAG  595

seq1  TAATACTCTTGTTGGTTACCTTAGCAAGACACAGATATGACTAAATAAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCTTGTTGGTTACCTTAGCAAGACACAGATATGACTAAATAAAA  645

seq1  AAAAAATAATATTATAGAACTGGGAAATTAGAATTTTTCATCTATTTAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAATATTATAGAACTGGGAAATTAGAATTTTTCATCTATTTAAA  695

seq1  CTTCTATTCAGTTTCATGTTATTATTTCACATTTCACCCTTTCTAGAAGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTCAGTTTCATGTTATTATTTCACATTTCACCCTTTCTAGAAGA  745

seq1  AGAAAACCAATGTGT----TGTGTGTGTGTGTGTGTGTGTGTTGTGTGTT  788
      |||||||||||||||    |||||||||||||||||||||||||||||||
seq2  AGAAAACCAATGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTT  795

seq1  CACATGCATGTATATATGTATATGCATGTATGTCTGTGATATGCACCTGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATGTATATATGTATATGCATGTATGTCTGTGATATGCACCTGA  845

seq1  GGACATGGGTGAATGTGTCTGCCTAAGAATGTGCATGTCCTCAGAATCAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGGTGAATGTGTCTGCCTAAGAATGTGCATGTCCTCAGAATCAA  895

seq1  GTTTTCCCATGTACCCAGTGCTGGTGACAAAGCAATAAGCAACTATGCCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCATGTACCCAGTGCTGGTGACAAAGCAATAAGCAACTATGCCC  945

seq1  AACATATTACATGTGTCCTGGGGATTGGAACTCAGGTTCTTATTCTTGAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTACATGTGTCCTGGGGATTGGAACTCAGGTTCTTATTCTTGAA  995

seq1  GATCAAGTACTTTTAACCACTGAGCCATCTACTCACCTCTAAGGAAAATC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTACTTTTAACCACTGAGCCATCTACTCACCTCTAAGGAAAATC  1045

seq1  CTCAATCTGTGGAAGAGTCTATGCTTTCCAGAAAAACGCAGGAATTC  1085
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCTGTGGAAGAGTCTATGCTTTCCAGAAAAACGCAGGAATTC  1092


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