BAC Information

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BAC

Clone NameB6Ng01-348L05
Chromosome15 (Build37)
Map Location 27,277,219 - 27,278,125
singlet/doubletsinglet
Overlap genenone
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348L05.bB6Ng01-348L05.g
ACCGA129918GA129919
length989910
definitionB6Ng01-348L05.b B6Ng01-348L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagctctttatatatcttgggtattagtacc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttacagaaggtttgcaatttta
tgaggtcccaattgtcgattctcagtcttacagaacaagccattgctgtt
ctattcaggaatttttcccctgtgccaatatctttgaggcgttcccccat
tttctcctctataagtttcagtgtctctgattttatatggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattccc
attcttctacatgataactgccagttgtgcaggcaccatttgttgaaatt
gctgtcttttttccactgcatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgcaggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcaatataccagtaccatgcaatttttatcacaattgc
tctgtagtacagctttagctcaggcatggtgattccaccagaggttcttt
tatccttgaggagagtttttgctatcctagattttttgttattccagatg
aatttgcagattgtcctttctaattcattgaagaattgagttggaattta
gattgcttttggcaagagatccatttttactatattgatcctaccatcca
taagcatgggagatctttccatcttctaagatcttgttaatttctttctt
cagagaattgaagtttttatcatacagttctttcacttccttagttagag
tcatgccaaggtattttatattatttgtgactattaagaagagtggttgt
tttccctaatttctcttctcagcctgtttatcctttgtg
gaattcaggtgtctactgagtccagaaagtgaattcatcattggaagtgg
tggtacaagaatttgtgagctgtctcatgtggatgctaggaatcaaacat
aggttctctacaagagcagtgtgctattaactgcagagccatttctctgg
tctaatgcaggtattgagcaaatgttggcaatatggtggcaagggtcatt
tggtctaagattgtcagggcttctgagcgtgcccagagattcctacttgg
tattcacctttggtgaagcatggcatctggaacataagcaagtcacatga
cattcaaggatggtgatggccataggttgggatgagtagccaacagagga
gcatgtgacagtccagtagtcactaagcaacactcacctgtcacttctgg
tatctagaaagattttaaaatgtgaccgttgctttcgaggggattaaatg
ctatgacctggttactctgagcaggtatgttttgtaggcagagtttaaaa
aattttttctggtaagcttgcaatgactttcaatgatctcatcttgtcaa
aaatctctgttgcaagatgttcagatgtacttagaaagtgaaattctcaa
tctgtttatctatttcaacactctatcattagcagctaggttacaaaaaa
tatttatttcaacagttccaatggttatttgtgtctcctaagtgaaggaa
cactacatggcttagagactcagtttctcctctttgctctgaaactggct
gagtatatgatcttgggataattcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttctcttcttcttcttctcttctgt
tcttcttctgttctcttgttctgtctcttcttcttctctctcttcttctc
tctctcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27277219_27278125
seq2: B6Ng01-348L05.g_68_977 (reverse)

seq1  AGAAGA-----AGAAGAAGA---AGAAGAAGAAGAACAAGAACAAGAAGA  42
      ||||||     |||||||||   ||||||||||||   |||||||| |||
seq2  AGAAGAGAGAGAGAAGAAGAGAGAGAAGAAGAAGAGACAGAACAAG-AGA  49

seq1  ACAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  92
      || ||||||||||| ||||| |||||||||||||| ||||||||||||||
seq2  AC-AGAAGAAGAAC-AGAAG-AGAAGAAGAAGAAG-AGAAGAAGAAGAAG  95

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTATCC  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTATCC  145

seq1  CAAGATCATATACTCAGCCAGTTTCAGAGCAAAGAGGAGAAACTGAGTCT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCATATACTCAGCCAGTTTCAGAGCAAAGAGGAGAAACTGAGTCT  195

seq1  CTAAGCCATGTAGTGTTCCTTCACTTAGGAGACACAAATAACCATTGGAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCATGTAGTGTTCCTTCACTTAGGAGACACAAATAACCATTGGAA  245

seq1  CTGTTGAAATAAATATTTTTTGTAACCTAGCTGCTAATGATAGAGTGTTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAAATAAATATTTTTTGTAACCTAGCTGCTAATGATAGAGTGTTG  295

seq1  AAATAGATAAACAGATTGAGAATTTCACTTTCTAAGTACATCTGAACATC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATAAACAGATTGAGAATTTCACTTTCTAAGTACATCTGAACATC  345

seq1  TTGCAACAGAGATTTTTGACAAGATGAGATCATTGAAAGTCATTGCAAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACAGAGATTTTTGACAAGATGAGATCATTGAAAGTCATTGCAAGC  395

seq1  TTACCAGAAAAAATTTTTTAAACTCTGCCTACAAAACATACCTGCTCAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGAAAAAATTTTTTAAACTCTGCCTACAAAACATACCTGCTCAGA  445

seq1  GTAACCAGGTCATAGCATTTAATCCCCTCGAAAGCAACGGTCACATTTTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAGGTCATAGCATTTAATCCCCTCGAAAGCAACGGTCACATTTTA  495

seq1  AAATCTTTCTAGATACCAGAAGTGACAGGTGAGTGTTGCTTAGTGACTAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTCTAGATACCAGAAGTGACAGGTGAGTGTTGCTTAGTGACTAC  545

seq1  TGGACTGTCACATGCTCCTCTGTTGGCTACTCATCCCAACCTATGGCCAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTCACATGCTCCTCTGTTGGCTACTCATCCCAACCTATGGCCAT  595

seq1  CACCATCCTTGAATGTCATGTGACTTGCTTATGTTCCAGATGCCATGCTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCTTGAATGTCATGTGACTTGCTTATGTTCCAGATGCCATGCTT  645

seq1  CACCAAAGGTGAATACCAAGTAGGAATCTCTGGGCACGCTCAGAAGCCCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGGTGAATACCAAGTAGGAATCTCTGGGCACGCTCAGAAGCCCT  695

seq1  GACAATCTTAGACCAAATGACCCTTGCCACCATATTGCCAACATTTGCTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCTTAGACCAAATGACCCTTGCCACCATATTGCCAACATTTGCTC  745

seq1  AATACCTGCATTAGACCAGAGAAATGGCTCTGCAGTTAATAGCACACTGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGCATTAGACCAGAGAAATGGCTCTGCAGTTAATAGCACACTGC  795

seq1  TCTTGTAGAGAACCTATGTTTGATTCCTAGCATCCACATGAGACAGCTCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAGAGAACCTATGTTTGATTCCTAGCATCCACATGAGACAGCTCA  845

seq1  CAAATTCTTGTACCACCACTTCCAATGATGAATTCACTTTCTGGACTCAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTTGTACCACCACTTCCAATGATGAATTCACTTTCTGGACTCAG  895

seq1  TAGACACCTGAATTC  907
      |||||||||||||||
seq2  TAGACACCTGAATTC  910