BAC Information

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BAC

Clone NameB6Ng01-348M21
Chromosome15 (Build37)
Map Location 28,784,452 - 28,785,084
singlet/doubletsinglet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348M21.bB6Ng01-348M21.g
ACCGA129984GA129985
length1,154633
definitionB6Ng01-348M21.b B6Ng01-348M21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggccgagaagcaccctaaaaaaat
gtacaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgata
tttcgcctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaaggggaacactcctccattgttggt
gggattgcaagcttttacaaccactctgtaaatcagtctggcagttcctc
agaaaattggacatagtactactggaggatctagcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccgtatttataattgccagaagctggaaagaacccaga
tgcccctcaacagaggaattgatacagaaaatgtggtacatttacaaaat
ggagtactactcagctattaaaaagaatgaatttatgaaatacctaggca
aatggatggacctggagggcatcaaaacccaatcacaaaggaactcgcac
aatatgtactcactgataagtggatattagcccagaaacttaggatacac
aagatataagatataatttgctaaatgcatgagactcaagaagaacgaag
accaaagtgtggacactttgccccttcttagaaatgggaacaaaacaccc
atggaaggagttacagagacaaaatttggagctgtgacgaaaggatggac
catctagtgattgccatatccagggatccatcccatcatcagcttccaaa
cgctgacaccattgcataaactagcaagattttgctgaaaggacccagat
atagctgtctcttgtgagactatgccggggcctagcaaacacagaagtgg
atgctcacagtcagctattgggatgtgtcacacgggcccccaatggagga
gctagagaaagtacccaaggagctaagggaactgcaaccctatagtgaac
acatatgaactaaccagtacccgcagctcttgactctagctacatatgta
tcaaagatgctagttgccatcactggaaagagagtcatgactgcaacttt
atatatgcctcagtacaggaatgcaagtcaaaacgcatgaattgttaagg
aatg

aatgaagttgacacaatctcaattcttagaggcatgcttcagtgcagagg
gaaacaaagatgttctttgacctttgaatcaacaagaaattcgcagctca
gaaatgtaacaccatatttccagtctcaattcactgatcagaaaatgaat
ttgtggctctatcagcatcaaaggaagagacttacccaattttgtactca
aaaaatcaatggaaaaaaatactaagtataaataactctgaacagttgcg
atgttctccattctaaccaacattaatacaatatatttaaccttcctgag
gaacacaatggaaacattcttcatccagtcatgacaggaatccctaaggc
ttgagccagtatggggagacacagagagatatacatcaaaggtgtcctgg
tgttaaattatcatgctgtaccttggatcttgcctcttgaaatactgaat
cttgtcaccttgattggatctagaatcaacaaagagataaacttctgggc
ctatcatgaggacaactccaataattcttaatgaaaccaaaaccaaaacc
aaaataataataataataataataataataataataataataataataaa
gccctgctcctaagagcagaatacaagaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28784452_28785084
seq2: B6Ng01-348M21.g_77_709 (reverse)

seq1  CTTCCTCTTGTATTCTGCTCTTAGGAGCAGGGCTTTATTATTATTATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTGTATTCTGCTCTTAGGAGCAGGGCTTTATTATTATTATTAT  50

seq1  TATTATTATTATTATTATTATTATTATTATTTTGGTTTTGGTTTTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTATTTTGGTTTTGGTTTTGGTTT  100

seq1  CATTAAGAATTATTGGAGTTGTCCTCATGATAGGCCCAGAAGTTTATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAATTATTGGAGTTGTCCTCATGATAGGCCCAGAAGTTTATCTC  150

seq1  TTTGTTGATTCTAGATCCAATCAAGGTGACAAGATTCAGTATTTCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGATTCTAGATCCAATCAAGGTGACAAGATTCAGTATTTCAAGAG  200

seq1  GCAAGATCCAAGGTACAGCATGATAATTTAACACCAGGACACCTTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATCCAAGGTACAGCATGATAATTTAACACCAGGACACCTTTGATG  250

seq1  TATATCTCTCTGTGTCTCCCCATACTGGCTCAAGCCTTAGGGATTCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCTCTGTGTCTCCCCATACTGGCTCAAGCCTTAGGGATTCCTGT  300

seq1  CATGACTGGATGAAGAATGTTTCCATTGTGTTCCTCAGGAAGGTTAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTGGATGAAGAATGTTTCCATTGTGTTCCTCAGGAAGGTTAAATA  350

seq1  TATTGTATTAATGTTGGTTAGAATGGAGAACATCGCAACTGTTCAGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATTAATGTTGGTTAGAATGGAGAACATCGCAACTGTTCAGAGTT  400

seq1  ATTTATACTTAGTATTTTTTTCCATTGATTTTTTGAGTACAAAATTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACTTAGTATTTTTTTCCATTGATTTTTTGAGTACAAAATTGGGT  450

seq1  AAGTCTCTTCCTTTGATGCTGATAGAGCCACAAATTCATTTTCTGATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTTCCTTTGATGCTGATAGAGCCACAAATTCATTTTCTGATCAG  500

seq1  TGAATTGAGACTGGAAATATGGTGTTACATTTCTGAGCTGCGAATTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGAGACTGGAAATATGGTGTTACATTTCTGAGCTGCGAATTTCTT  550

seq1  GTTGATTCAAAGGTCAAAGAACATCTTTGTTTCCCTCTGCACTGAAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTCAAAGGTCAAAGAACATCTTTGTTTCCCTCTGCACTGAAGCAT  600

seq1  GCCTCTAAGAATTGAGATTGTGTCAACTTCATT  633
      |||||||||||||||||||||||||||||||||
seq2  GCCTCTAAGAATTGAGATTGTGTCAACTTCATT  633


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