CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTAATTAAACACCGAGAGATCAGGATACAGAGAGAAAAAAGAGAAGTC
TCTGCACAAAGGCAGTTGACAGAACTCAGCTGCCTGCAACCCAGTGAATG
TTGTCCCAGGAAATCCCTCTGTTTCCTTCTTGTCTTTTACTTTAGAGCCT
CATAAACTTCAGAGCAACTTTCCCTTTTGCAATCCAATATAGAACCTACC
CATAGAAGCATCAATGAAGCCAACAGGTATCTATATACACAGTGAAGCCA
TGTCTAAATGACATGAAACCAGGCTTATCGTTTATATTTGCAGTAGATTG
TCCATTTTATATTTTGTTAAGTCATATGTAATTTATACCATAGTGAGAGT
TTACTTTTGGCTGCATTATTATTATTATTATTATTACCTTTTTTTAATGT
CTGATCATCACTCCACACCCCATCTGCTGTCCCACAGTTCCCCATCCCAT
TCCTCTTACCCCATGTCTCCAAGAGGATGTTCCCACCTTGCCAGGCTTCC
CATGCCCTGGGGCCTCAAGTCTCTCAAGGGTCAGGTGAGTCTTCTCCCTC
TGAGGCCAGACCAGGCAGCCCTCTGCTGTCTATGAGTTACAAGCCTCAGA
CCAGGTCTTGTATACTGCCTGCT

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTACCTGAGGAATACCAAATGGCTGAG
AAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAAT
CAAAATATTCCTGATATTCCACCTCACACCAGCCAGAATGGCTAAGATCA
AAAATTCAGATGACAGCAGATGCTGATGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGAATTGAAAGCTTGTACAGCCACTCTGAAAATC
AGTCTGGCAGTTGCTCAGAAAATTGGACATATTACTACAGGAGGATCATG
CAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTGGTAAGAAG
GACACATGCTCCGCTATGTTCATAGCAGCCTTATTTGTAATAGCCAGAAG
CTGGGTGAGGCCTCAATTCTCTCCAGGATTAAGGTTTTCTCCCATTGAAG
CCAGACTTCTGCTATATAAGTGCCAGAGGCCTAAGATGAGCCTATGTATG
CTGTAGGCTTCTGCCTCAGTCTCTGGAAGTTCCCTATGGTCTGGGTTAGT
TGAGACTGCTGGTCTTCCTATGGGGTTACTCTCCCTTTCAGTTTCTTCTG
TGCTTCCTCGAATTCACCATAC

Query= MSMg01no045_f20.b1 MSMg01no045_f20.b1 CHROMAT_FILE:
MSMg01no045_f20.b1 PHD_FILE: MSMg01no045_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:18 2005
         (606 letters)



>mm_chr15_20965688_20966694
          Length = 1007

 Score =  982 bits (508), Expect = 0.0
 Identities = 556/572 (97%), Gaps = 2/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaattaaacaccgagagatcaggatacagagagaaaaaagagaagtctctgcac 64
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctaattaaacacaaagagatcaggatacagagagaaaaaagagaagtctctgcac 512

                                                                       
Query: 65  aaa-ggcagttgacagaactcagctgcctgcaacccagtgaatgttgtcccaggaaatcc 123
           ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 511 aaagggcagttgacagaactcagctgcctgcaaccaagtgaatgttggcccaggaaatcc 452

                                                                       
Query: 124 ctctgtttccttcttgtcttttactttagagcctcataaacttcagagcaactttccctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctctgtttccttcttgtcttttactttagagcctcataaacttcagagcaactttccctt 392

                                                                       
Query: 184 ttgcaatccaatatagaacctacccatagaagcatcaatgaagccaacaggtatctatat 243
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 391 ttgcaatccaatatagaacctacccatagaagcatcaatgaagccaatgggtatctatat 332

                                                                       
Query: 244 acacagtgaagccatgtctaaatgacatgaaaccaggcttatcgtttatatttgcagtag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acacagtgaagccatgtctaaatgacatgaaaccaggcttatcgtttatatttgcagtag 272

                                                                       
Query: 304 attgtccattttatattttgttaagtcatatgtaatttataccatagtgagagtttactt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attgtccattttatattttgttaagtcatatgtaatttataccatagtgagagtttactt 212

                                                                       
Query: 364 ttggctgcattattattattattattattacctttttttaatgtctgatcatcactccac 423
           ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttggctgtattattattattgttattattacctttttttaatgtctgatcatcactccac 152

                                                                       
Query: 424 accccatctgctgtcccacagttccccatcccattcctcttaccccatgtctccaagagg 483
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 151 accccatctgctgtcccacagttcctcatcccattcctcttaccccatgtctccaagagg 92

                                                                       
Query: 484 atgttcccaccttgccaggcttcccatgccctggggcctcaagtctctcaagggtcaggt 543
            ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| 
Sbjct: 91  gtgttcccaccttgccaggcttcccacgtcctggggcctcaagtctctcaagggtcaggc 32

                                           
Query: 544 gagtcttctccctctgaggccagaccaggcag 575
           |||||||||||||||||||  |||||||||||
Sbjct: 31  gagtcttctccctctgaggg-agaccaggcag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space:   594212
Effective search space used:   594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)