CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTATAGTTTCTCCATCCATAGTAATTGAGAGTTTAGCTGGGTATAGTAA
CCTGGGCTGGCATTTGTGTTCTCTTAGTGTCTGTAGAACATCTGTCCAGA
AGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCCA
GGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATACACT
AGCAAGATTTTGCTGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTA
TGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCACCTATTGGA
TGGATCACAGGGCTCCCAATGGAAGAGCTAGAGAAAGTACCCAAGGAGCT
AAAGGGCTCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA
CCCTGGAGCTCTTGACTTTAGCTGCATATGTATCAAAAGATGGCCTAGTC
GGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAATTTTATATGCCC
CAGTACAGGGGAATGCCAGGGCCAAAAAAATTGGAATGGGTGGGTAGGGA
AGTTGGTGGGNNNTTTTTNTTTTCTCCTTTCTTTTTTTTTCTTCTCTCTC
CCTTTTCCGTCCTCTTCTTTCCTCTTTTTTTCCCTTTTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTAGCAAGGAAGAGATCAGTGGTCAG
ACACACTAGTCTTTCCGACTGTTAGTGCATAGCTGGACCACCAGTGAGTT
TTAATTTGCAATGCCCTAATGCAAATAAACAAGAGTAAAAATGATGACAC
AAAGATTCAACTGAAGCGTTAAGGCAATATTCACTAACCACAAAGAAGCA
TTAAATTCTGTAGACTTTAGTTATCTACTGCCAGACTGAGGTGACATTTC
ATACTCTTAAAGCCAAAGGACACTACATTCTTCATCACTAAGTAATGAAA
TTAAACCAATTCTTTATATTCTTACTCTGAAACCCATATGCAGAAGTGTG
AAGGTTTTTTTATTCTTGGCTTTTTTTTTTTGCAAACACATCCGCTTGTT
TTTTTTCACTTTTATTATGTAGGTTAATTCAAGGTCAAACAATTGATACT
GTGTTGTGATTTCATTCCTGTGCATTCTCTCACATAACTACTGGCATTTA
TGAGCATACTCAGGTATACTGTGTTTACAAGTTATGCATTTCATCTGCTC
TCCTGCTTCTAACAAATTGTGTTATACAAGCAATGGTTCCAGAATAACTA
CCAGGCTTTAGCAGAAGGATTTTATTGTAACTGCTAATTA

Query= MSMg01no046_d13.g1 MSMg01no046_d13.g1 CHROMAT_FILE:
MSMg01no046_d13.g1 PHD_FILE: MSMg01no046_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:20 2005
         (617 letters)



>mm_chr15_4712268_4713288
          Length = 1021

 Score = 1166 bits (603), Expect = 0.0
 Identities = 615/621 (99%), Gaps = 4/621 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctagcaaggaagagatcagtggtcagacacactagtctttccgactgttagtgcatagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tctagcaaggaagagatcagtggtcagacacactagtctttccgactgttagtgcatagc 762

                                                                       
Query: 61  tggaccaccagtgagttttaatttgcaatgccctaatgcaaataaacaagagtaaaaatg 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tggaccaccagtgaggtttaatttgcaatgccctaatgcaaataaacaagagtaaaaatg 702

                                                                       
Query: 121 atgacacaaagattcaactgaagcgttaaggcaatattcactaaccacaaagaagcatta 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 701 atgacacaaagattcaactgaagcgttaaggcaatattaactaaccacaaagaagcatta 642

                                                                       
Query: 181 aattctgtagactttagttatctactgccagactgaggtgacatttcatactcttaaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aattctgtagactttagttatctactgccagactgaggtgacatttcatactcttaaagc 582

                                                                       
Query: 241 caaaggacactacattcttcatcactaagtaatgaaattaaaccaattctttatattctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caaaggacactacattcttcatcactaagtaatgaaattaaaccaattctttatattctt 522

                                                                       
Query: 301 actctgaaacccatatgcagaagtgtgaaggtttttttattcttggc----ttttttttt 356
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 521 actctgaaacccatatgcagaagtgtgaaggtttttttattcttggcttttttttttttt 462

                                                                       
Query: 357 ttgcaaacacatccgcttgttttttttcacttttattatgtaggttaattcaaggtcaaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttgcaaacacatccgcttgttttttttcacttttattatgtaggttaattcaaggtcaaa 402

                                                                       
Query: 417 caattgatactgtgttgtgatttcattcctgtgcattctctcacataactactggcattt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caattgatactgtgttgtgatttcattcctgtgcattctctcacataactactggcattt 342

                                                                       
Query: 477 atgagcatactcaggtatactgtgtttacaagttatgcatttcatctgctctcctgcttc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atgagcatactcaggtatactgtgtttacaagttatgcatttcatctgctctcctgcttc 282

                                                                       
Query: 537 taacaaattgtgttatacaagcaatggttccagaataactaccaggctttagcagaagga 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taacaaattgtgttatacaagcaatggttccagaataactaccaggctttagcagaagga 222

                                
Query: 597 ttttattgtaactgctaatta 617
           |||||||||||||||||||||
Sbjct: 221 ttttattgtaactgctaatta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1021
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1011
Effective search space:   613677
Effective search space used:   613677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)