CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTATAGTTTCTCCATCCATAGTAATTGAGAGTTTAGCTGGGTATAGTA
ACCTGGGCTGGCATTTGTGTTCTCTTAGTGTCTGTAGAACATCTGTCCAG
AAGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCC
AGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATACAC
TAGCAAGATTTTGCTGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACT
ATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCACCTATTGG
ATGGATCACAGGGCTCCCAATGGAAGAGCTAGAGAAAGTACCCAAGGAGC
TAAAGGGCTCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGT
ACCCTGGAGCTCTTGACTTTAGCTGCATATGTATCAAAAGATGGCCTAGT
CGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAATTTTATATGCC
CCAGTACAGGGGAATGCCAGGGCCAAAAAAATTGGAATGGGTGGGTAGGG
AAGTTGTGGGGGCTATTTTTCTCCTAATTTCATTTATCCACATCACACCC
CTTGCTGCCTAATTCCCTCCTTCCTATTTCTCTCTTTTCTCTTACTT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTAGCAAGGAAGAGATCAGTGGTCAGA
CACACTAGTCTTTCCGACTGTTAGTGCATAGCTGGACCACCAGTGAGTTT
TAATTTGCAATGCCCTAATGCAAATAAACAAGAGTAAAAATGATGACACA
AAGATTCAACTGAAGCGTTAAGGCAATATTCACTAACCACAAAGAAGCAT
TAAATTCTGTAGACTTTAGTTATCTACTGCCAGACTGAGGTGACATTTCA
TACTCTTAAAGCCAAAGGACACTACATTCTTCATCACTAAGTAATGAAAT
TAAACCAATTCTTTATATTCTTACTCTGAAACCCATATGCAGAAGTGTGA
AGGTTTTTTTATTCTTGGCTTTTTTTTTTTGCAAACACATCCGCTTGTTT
TTTTTCACTTTTATTATGTAGGTTAATTCAAGGTCAAACAATTGATACTG
TGTTGTGATTTCATTCCTGTGCATTCTCTCACATAACTACTGGCATTTAT
GAGCATACTCAGGTATACTGTGTTTACAAGTTATGCATTTCATCTGCTCT
CCTGCTTCTAACAAATTGTGTTATACAAGCAATGGTTCCAGAATAACTAC
CAGGCTTTTAACAAAAAGATTTTATTGTAACTGCTAATTAAGA

Query= MSMg01no046_e14.g1 MSMg01no046_e14.g1 CHROMAT_FILE:
MSMg01no046_e14.g1 PHD_FILE: MSMg01no046_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:25 2005
         (550 letters)



>mm_chr15_4712335_4713288
          Length = 954

 Score = 1036 bits (536), Expect = 0.0
 Identities = 548/554 (98%), Gaps = 4/554 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctagcaaggaagagatcagtggtcagacacactagtctttccgactgttagtgcatagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tctagcaaggaagagatcagtggtcagacacactagtctttccgactgttagtgcatagc 695

                                                                       
Query: 61  tggaccaccagtgagttttaatttgcaatgccctaatgcaaataaacaagagtaaaaatg 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tggaccaccagtgaggtttaatttgcaatgccctaatgcaaataaacaagagtaaaaatg 635

                                                                       
Query: 121 atgacacaaagattcaactgaagcgttaaggcaatattcactaaccacaaagaagcatta 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 634 atgacacaaagattcaactgaagcgttaaggcaatattaactaaccacaaagaagcatta 575

                                                                       
Query: 181 aattctgtagactttagttatctactgccagactgaggtgacatttcatactcttaaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aattctgtagactttagttatctactgccagactgaggtgacatttcatactcttaaagc 515

                                                                       
Query: 241 caaaggacactacattcttcatcactaagtaatgaaattaaaccaattctttatattctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caaaggacactacattcttcatcactaagtaatgaaattaaaccaattctttatattctt 455

                                                                       
Query: 301 actctgaaacccatatgcagaagtgtgaaggtttttttattcttggc----ttttttttt 356
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 454 actctgaaacccatatgcagaagtgtgaaggtttttttattcttggcttttttttttttt 395

                                                                       
Query: 357 ttgcaaacacatccgcttgttttttttcacttttattatgtaggttaattcaaggtcaaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgcaaacacatccgcttgttttttttcacttttattatgtaggttaattcaaggtcaaa 335

                                                                       
Query: 417 caattgatactgtgttgtgatttcattcctgtgcattctctcacataactactggcattt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 caattgatactgtgttgtgatttcattcctgtgcattctctcacataactactggcattt 275

                                                                       
Query: 477 atgagcatactcaggtatactgtgtttacaagttatgcatttcatctgctctcctgcttc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgagcatactcaggtatactgtgtttacaagttatgcatttcatctgctctcctgcttc 215

                         
Query: 537 taacaaattgtgtt 550
           ||||||||||||||
Sbjct: 214 taacaaattgtgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 954
Length adjustment: 10
Effective length of query: 540
Effective length of database: 944
Effective search space:   509760
Effective search space used:   509760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)