Query= MSMg01no051_g09.b1 MSMg01no051_g09.b1 CHROMAT_FILE:
MSMg01no051_g09.b1 PHD_FILE: MSMg01no051_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:01 2005
(146 letters)
>mm_chr15_44548142_44548686
Length = 545
Score = 217 bits (112), Expect = 3e-61
Identities = 138/150 (92%), Gaps = 9/150 (6%)
Strand = Plus / Plus
Query: 1 agtagtgaatcagcaactacaagtgactg---cccttattttaatggacttgcagtaaac 57
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 agtagtgaatcagcaactacaagtgactggaa----tattttaatggacttgcagtaaac 256
Query: 58 cagttagggct-gaaacttctgggtaaaatagtgtacaatcctgacagcacccacaaaca 116
|||||| || | |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cagtta-ggatagaaagttctgggtaaaatagtgtacaatcctgacagcacccacaaaca 315
Query: 117 ggtatagtgtatgtgtgagggggtgagtgg 146
|||||||||||||||||||||||||||||
Sbjct: 316 agtatagtgtatgtgtgagggggtgagtgg 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 545
Length adjustment: 8
Effective length of query: 138
Effective length of database: 537
Effective search space: 74106
Effective search space used: 74106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no051_g09.g1 MSMg01no051_g09.g1 CHROMAT_FILE:
MSMg01no051_g09.g1 PHD_FILE: MSMg01no051_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:02 2005
(280 letters)
>mm_chr15_44722777_44723456
Length = 680
Score = 470 bits (243), Expect = e-137
Identities = 266/275 (96%), Gaps = 3/275 (1%)
Strand = Plus / Minus
Query: 6 ttttgttacacagttgtcttaatgagaatgctaatctgccttgcggccatctggccctat 65
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 590 ttttgttacacaattgtcttaatgagaatgctaatctgccatgcggccatctggccatat 531
Query: 66 aaagcaaagacagatttatctggatacattcttctttgtgcagaaattggaccctcatag 125
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 530 aaagcaaagacagatttatctggataca---ttctttgtgcagaaattggaccctcatag 474
Query: 126 agtcagggtttggctagaggctactgccttgcagagaactacagtacaagcactgctttc 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 473 agtcagggtttggctagaggctactgccttgcagagaactacagtacaagcaatgctttc 414
Query: 186 acagctctgaggtgatacggaatattttaagtatggtaggcataaatcattttagaaaag 245
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acagctctgaggtgataaggaatattttaagtatggtaggcataaatcattttagaaaag 354
Query: 246 actgtccaaaaagtataggcacagacagaaagtag 280
||||||||||||||| |||||||||||||||||||
Sbjct: 353 actgtccaaaaagtagaggcacagacagaaagtag 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
