Query= MSMg01no053_e19.b1 MSMg01no053_e19.b1 CHROMAT_FILE:
MSMg01no053_e19.b1 PHD_FILE: MSMg01no053_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:10 2005
(532 letters)
>mm_chr15_22338930_22339861
Length = 932
Score = 967 bits (500), Expect = 0.0
Identities = 521/528 (98%)
Strand = Plus / Plus
Query: 5 gaattctatactgacatgggccttatgaaaattgctcatctttcatgcagttataagatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatactgacatgggccttatgaaaattgctcatctttcatgcagttataagatc 264
Query: 65 ttaccacttcaaaactagcacccaaaatatcctttaccctgaatttctaacttagactgt 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 ttaccacttcaaaactagcacccaaaatatcctctaccctgaatttctaacttagactgt 324
Query: 125 agtgtttgtttaccacaactgtaaaacactaaatagatgtactgaggaaagaaaatatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtgtttgtttaccacaactgtaaaacactaaatagatgtactgaggaaagaaaatatta 384
Query: 185 agccaacggaaatggaatcatttgatggagtttttactaccaattggctattagggaact 244
||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 385 agccaacagaaatggaatcatttgatggagttttcactaccaattggctattagagaact 444
Query: 245 gatctcattgttcccattcctcccattccactctttcacactgtgtcttctccaaaaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatctcattgttcccattcctcccattccactctttcacactgtgtcttctccaaaaata 504
Query: 305 tgaaaaaaaaatacactgatttaaatctctggtagggatttatttttctgactgcttctt 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 tgaaaaaaaaaaacactgatttaaatctctggtagggatttatttttctgactgcttgtt 564
Query: 365 gccttgtactccactcatggcccattaaatattatacaatataatcattatggggaaaga 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gccttgtactccactcatgacccattaaatattatacaatataatcattatggggaaaga 624
Query: 425 caaatgcaaaatgtcagagtagcctacttaatcatcttgcctccattgtaacaatgtgtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaatgcaaaatgtcagagtagcctacttaatcatcttgcctccattgtaacaatgtgtg 684
Query: 485 acttcttggaactcttctattttattttatttttttcagcttacttga 532
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acttcttggaactcttctattttattttatttttttcagcttacttga 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_e19.g1 MSMg01no053_e19.g1 CHROMAT_FILE:
MSMg01no053_e19.g1 PHD_FILE: MSMg01no053_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:10 2005
(332 letters)
>mm_chr1_196277977_196278709
Length = 733
Score = 605 bits (313), Expect = e-177
Identities = 328/333 (98%), Gaps = 1/333 (0%)
Strand = Plus / Plus
Query: 1 tctgtactccctgccctccaaccttcagaacagtaatcttgggcaatttctatttaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtactccctgccctccaaccttcagaacagtaatcttgggcaatttctatttaatgt 260
Query: 61 ggattgcctactcctgacaggtgtcaagtgtgaggatctttgcctttcagagagatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattgcctactcctgacaggtgtcaagtgtgaggatctttgcctttcagagagatgaaa 320
Query: 121 agattttcatggggtaaggagcctgatactggccttcaaagggaacaaa-tagccttctt 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 agattttcatggggtaaggagcctgatactggccttcaaagggaacaaaatagccttctt 380
Query: 180 tcctagactgaagcaggccaacatggttctaacctccctagcagaattcctgttagttct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctagactgaagcaggccaacatggttctaacctccctagcagaattcctgttagttct 440
Query: 240 tgttggtctttatttcagcattgaccatgtaaggcctcagtgttcttccttctcattctg 299
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctggtctttaggtcagcattgaccatgtaaggcctcagtgttcttccttctcattctg 500
Query: 300 ttttgtacttttccctgtcttacagtagtgtgt 332
|||||| ||||||||||||||||||||||||||
Sbjct: 501 ttttgtgcttttccctgtcttacagtagtgtgt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
