Query= MSMg01no053_h02.b1 MSMg01no053_h02.b1 CHROMAT_FILE:
MSMg01no053_h02.b1 PHD_FILE: MSMg01no053_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:21 2005
(419 letters)
>mm_chr3_111259809_111260627
Length = 819
Score = 748 bits (387), Expect = 0.0
Identities = 411/419 (98%)
Strand = Plus / Plus
Query: 1 aattgtcaagtttcaactatgtcttagagagttgaaaatacattataatattgatatttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 aattgtcaagtttcaactatgtcttagagagttgaaaatacattataatattgagatttg 260
Query: 61 aaaataacaaacataatcttccttgagtgtttcaaaacaatacagaacttagataaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaataacaaacataatcttccttgagtgtttcaaaacaatacagaacttagataaggta 320
Query: 121 ccatacatatgaacaagagtgcgcctgtaaaacaaatttgaaggctaatattccaataat 180
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ccatacatatgaacaagagtgcacctgtaaaacaattttgaaggctaatattccaataat 380
Query: 181 tcaatagggtaagctctaatattaaatagaatccaaattcagcagctcaagtaaaattaa 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||
Sbjct: 381 tcaatagggtaagctctaatattaaatagaatctaaattcagcagctcaagtataatcaa 440
Query: 241 tgcttacttcctttattaaattgcttggtacaaatgaatcttctggtaacactggctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcttacttcctttattaaattgcttggtacaaatgaatcttctggtaacactggctgga 500
Query: 301 tgagagctgtcttcctatgtgcagagcattcagaacttacctcatatagctttttccacc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 tgagagctgtcttcctatgtgcagagcattcagaacttacctcatatagctttttccagc 560
Query: 361 tatttgactaaaggacagtaagctcttatattacaataatgtaaagcttgaatatagca 419
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttgactaaaggacagtaagcttttatattacaataatgtaaagcttgaatatagca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_h02.g1 MSMg01no053_h02.g1 CHROMAT_FILE:
MSMg01no053_h02.g1 PHD_FILE: MSMg01no053_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:21 2005
(336 letters)
>mm_chr15_34345646_34346385
Length = 740
Score = 584 bits (302), Expect = e-171
Identities = 329/340 (96%), Gaps = 4/340 (1%)
Strand = Plus / Plus
Query: 1 ctgtgacctcacacaccctc----tgcagaaagtgggcagtgtaagaagtgacaagtgtt 56
|||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||
Sbjct: 201 ctgtgacctcacacaccctctgcatgcagaaagtgggcagtgtgagaagtgagaagtgtt 260
Query: 57 ctataaggctaccttagaggaaaggtggggagcccgggagtggggagccctgcagtaatt 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctataaggctaccttagaggaaaggtggggagcccgggagtggggagccctgcagtaata 320
Query: 117 aagtccacatcataggatctggtggacattctcaatgaaaattctaggtagagagtgttg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtccacatcataggatctggtggacattctcaatgaaaattctaggtagagagtgttg 380
Query: 177 ggagtcacgggacctttgaaacctcaaatcttagcaccagtgatacacttcctctaacaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagtcacgggacctttgaaacctcaaatcttagcaccagtgatacacttcctctaacaa 440
Query: 237 gaccatacattcttatccttctaatcctttcaaatggcatcactccttgatccctaagct 296
|||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 441 gaccatacattccaatccttctaatcctttcaaatggtatcactccttgatcactaagct 500
Query: 297 ttcatatataagagcctatgaggaatattctttttcaaac 336
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcatatataagagcctatgaggaatattctttttcaaac 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 740
Length adjustment: 9
Effective length of query: 327
Effective length of database: 731
Effective search space: 239037
Effective search space used: 239037
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
