Query= MSMg01no054_g02.b1 MSMg01no054_g02.b1 CHROMAT_FILE:
MSMg01no054_g02.b1 PHD_FILE: MSMg01no054_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:33 2005
(217 letters)
>mm_chr15_66132853_66133475
Length = 623
Score = 369 bits (191), Expect = e-107
Identities = 213/223 (95%), Gaps = 6/223 (2%)
Strand = Plus / Minus
Query: 1 ttgacctcagcagactgttatgaccccgcctagtcacctgactttcatgttcacccatga 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 423 ttgacctcagcagactgttatgaccaggcctagtcacctgactttcatgttcacccatga 364
Query: 61 tcactcaggggaaaggtactccctctgattcaccctacagtctacagc----ccccca-- 114
|||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 363 tcactcaggggaaaggtactccctctgattcaccttacagcctacagccccacccccacc 304
Query: 115 ccccagtgtagtgactgacctacccacccatcagtgatgtgtgctaacataaggatgctt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccccagtgtagtgactgacctacccacccatcagtgatgtgtgctaacataaggatgctt 244
Query: 175 gccagttgtactgactgcctctgggtctgcctaactccaaatc 217
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gccagttgtactgactgcctctgggtctgcctaactccaaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 623
Length adjustment: 9
Effective length of query: 208
Effective length of database: 614
Effective search space: 127712
Effective search space used: 127712
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no054_g02.g1 MSMg01no054_g02.g1 CHROMAT_FILE:
MSMg01no054_g02.g1 PHD_FILE: MSMg01no054_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:33 2005
(451 letters)
>mm_chr15_66041448_66042298
Length = 851
Score = 596 bits (308), Expect = e-174
Identities = 338/348 (97%)
Strand = Plus / Plus
Query: 104 atgtaaacttctgagcaggtggggaacaagcactcttggagggatgaatacttaggtggg 163
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atgtaaacttctgagcaggtgaggaacaagcactcttggagggatgaatacttaggtggg 363
Query: 164 gaaatagcaaggtggatgctgtgggttaggatgatggctgtgcagggcaaatcaagccct 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaaatagcaaggtggatgctgtgggttaggatgatggctgtgcagggcaaatcaagccct 423
Query: 224 gaaaaccactttccaagcaactcttgtgcattgtaatatctgggatgtatgagtgccaag 283
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 gaaaaacactttccaagcaactcttgtgcattgtaatatctgggatgcatgagtgccaag 483
Query: 284 tgtcagaggagatctcgtactctgtaagcagaaacttcaaaagagccaccaattggctcg 343
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 484 tgtcagagcagatctcgtactctgtaagcagaaacttcaaaagagccaccaattggcttg 543
Query: 344 gtctatgggactctgggcatatctctgtgctccaagctcttcctgtgtaaaacaggcgca 403
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 544 gtctatgggactctgggcatttctctgtgctccaagctcttcttgtgtaaaacaggtgca 603
Query: 404 aaaatctgatgacattctaaggatacataggccactgaacaggatgta 451
||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 604 aaaatctgatgacattctaaggatacagaggccattgaacaggatgta 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
