Query= MSMg01no054_h06.b1 MSMg01no054_h06.b1 CHROMAT_FILE:
MSMg01no054_h06.b1 PHD_FILE: MSMg01no054_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:38 2005
(498 letters)
>mm_chr15_103303968_103304865
Length = 898
Score = 605 bits (313), Expect = e-177
Identities = 343/361 (95%), Gaps = 14/361 (3%)
Strand = Plus / Minus
Query: 152 aaaactaaagaagtgtacaagagaacatggacacatgcctttaatcccagcactcaggag 211
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 898 aaaactaaagaagtgtacaagagaacatggacacatgcctttaatcccaacactcaggag 839
Query: 212 gcagaggtaggcagaactatataagccaaccacagtgagtttcaggacacccaagactac 271
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 838 gcagaggcaggcagaactatataagccaaccacggtgagtttcaggacacccaagactac 779
Query: 272 acaaaaaccctgtctccaaaactctgagagagagagagagagagagagagagagagagag 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 acaaaaaccctgtctccaaaactctgagagagagagagagagagagagagagagagagag 719
Query: 332 agaga-------------a-tatcaagtgaacgatgaaatcagaaacaggacacaccata 377
||||| | |||||||||||||||||||||||||||||||||||||| |
Sbjct: 718 agagagagagagagagagagtatcaagtgaacgatgaaatcagaaacaggacacaccaga 659
Query: 378 aagtagaaaggtcagaggtttccaccagcattttctctactgagtccaacatctgggagt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aagtagaaaggtcagaggtttccaccagcattttctctactgagtccaacatctgggagt 599
Query: 438 gaaagatgatgaggttcatgaccttggctaggtcagggttctcatgcaggtgcaaaggtg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaaagatgatgaggttcatgaccttggctaggtcagggttctcatgcaggtgcaaaggtg 539
Query: 498 c 498
|
Sbjct: 538 c 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_h06.g1 MSMg01no054_h06.g1 CHROMAT_FILE:
MSMg01no054_h06.g1 PHD_FILE: MSMg01no054_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:38 2005
(481 letters)
>mm_chr15_103226002_103226882
Length = 881
Score = 899 bits (465), Expect = 0.0
Identities = 477/481 (99%)
Strand = Plus / Plus
Query: 1 agacagatatggaaatgagctcaaacagaaacagtttgagagaccaattgagtgcacaga 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 agacagatatggaaatgagctcaaacagaaacagtttgagagagaaattgagtgcacaga 260
Query: 61 atcaaaaattaaggaagctggatgcagttagcaaccaaaaatatgaagttctgatcataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaaaattaaggaagctggatgcagttagcaaccaaaaatatgaagttctgatcataa 320
Query: 121 cttactattaagaaactgttatagtcttagcaaagattaaatttcaggaatttttcacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttactattaagaaactgttatagtcttagcaaagattaaatttcaggaatttttcacct 380
Query: 181 aggtgacatttgcctgcagcaaatatttaacattttaaatacacaactgtagtacatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtgacatttgcctgcagcaaatatttaacattttaaatacacaactgtagtacatacc 440
Query: 241 catgaaacataataaatactgaaaagggctggcgacacagtatactcaagctctggcctt 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 catgaaacataataaatactgaaaagggctggggacacagtatactcaagctctggcctt 500
Query: 301 aagaaaacatcaaaaccctaagaaactccccactggaatttatcaagcagatagtgataa 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 aagaaaacatcaaaaccctaagaaactccccactggaatttatcaagtagatagtgataa 560
Query: 361 taaccatctgtgtttgtcttaatcccatcaacctggatttttagagagaacccactatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaccatctgtgtttgtcttaatcccatcaacctggatttttagagagaacccactatcc 620
Query: 421 agacctgcttatcattctctctgcaatgtttcacattgcatatactatttccattaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agacctgcttatcattctctctgcaatgtttcacattgcatatactatttccattaaagt 680
Query: 481 t 481
|
Sbjct: 681 t 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
