CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTCCAGCCTCCTTTCCAGAGCCACCTTTGCATGAGTTTATGAGCAG
GCAGCAACATGCTGTCTGGTTTCTCTGACACTATTGTACCACTTCTTGAC
TCTATGTCTTGCTTCTGAGTGCCATTCTGTCAGTCTATGACATACCTCTA
AACACTTTCTGTCTGAGATGGCCTCCACACCTTCCAACATTGCTCAGACA
TCAGCCTGGTTCCAGGAAATCTTTAGTGTATCCAGCCTTTTCCCAAGGGT
ATAGACAGTTCACCCATTTCCCTCTCCAGGTTGACCTCTTATTCTATTTC
TGTGTTGCTACTTTATGGTAATACATTTCATAGTGTTTTCTCTTTAATTA
TATAAAAGTAGTTAGTTCTGGGGAAGGGGATCTATTCTATTTATCTGTTA
CCTCTAAACACAGTATGACCATATTTTCTAGGTGAATGAATGCATGAATC
CATAAACAAATGAATGCAGACAATCTGAGACTCCACTCTGCCACCTAAGC
TAACTCCTTCCTTTCGTACTTGTACGGCACCACCAGCATCCATGTCTCCA
AGGAAAGACACTAGTAAAATCTACTTCCCTGTTTAAGTAAAGAAGAGTAA
ATGCAATTTAATATGAGGACTGAGCATAACTCTTAAATAATGTCCGTTTA
A

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCAT
GAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGA
TCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTGATG
GATTTTCGTATATTAAACCATCCCTGCATTCCTGGAATAAAACCTACTTG
GTCAGGATGGATGATTGCTTTAATGTGATCTTGGATTCGGTTAGCGAGAA
TTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAG
TTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGT
GGCTTCATAAAATGAGTTGGGTAGAGTACTTTCTACTTCTATCTTGTGAA
AAAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAAC
TCTGCACTAAACCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATT
TATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAA
CTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCC
ATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGA
TCTG

Query= MSMg01no054_p20.b1 MSMg01no054_p20.b1 CHROMAT_FILE:
MSMg01no054_p20.b1 PHD_FILE: MSMg01no054_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:18 2005
         (657 letters)



>mm_chr15_65987153_65988209
          Length = 1057

 Score = 1087 bits (562), Expect = 0.0
 Identities = 631/654 (96%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctccagcctcctttccagagccacctttgcatgagtttatgagcaggcagcaa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctccagcctcctttccagagccacctttgcatgagtttatgagcaggcagcaa 263

                                                                       
Query: 64  catgctgtctggtttctctgacactattgtaccacttcttgactctatgtcttgcttctg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catgctgtctggtttctctgacactattgtaccacttcttgactctatgtcttgcttctg 323

                                                                       
Query: 124 agtgccattctgtcagtctatgacatacctctaaacactttctgtctgagatggcctcca 183
           |||||||||| |||||||| ||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 324 agtgccattccgtcagtctgtgacatacctctaaacactttccatctgaaatggcctcca 383

                                                                       
Query: 184 caccttccaacattgctcagacatcagcctggttccaggaaatctttagtgtatccagcc 243
           | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 cgccttccaacattgctcagacatcagcctggttccaggaaacctttagtgtatccagcc 443

                                                                       
Query: 244 ttttcccaagggtatagacagttcacccatttccctctccaggttgacctcttattctat 303
           |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 ttttcccaagggtatagacaattcacccatttccctctccaggttgacctctgattctat 503

                                                                       
Query: 304 ttctgtgttgctactttatggtaatacatttcatagtgttttctctttaattatataaaa 363
           |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 504 ttctgtgttgctactttatggtaatacatttcattgtgttttctcttcaattatataaaa 563

                                                                       
Query: 364 gtagttagttctggggaaggggatctattctatttatctgttacctctaaacacagtatg 423
            ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctagttagttctggagtaggggatctattctatttatctgttacctctaaacacagtatg 623

                                                                       
Query: 424 accatattttctaggtgaatgaatgcatgaatccataaacaaatgaatgcagacaatctg 483
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 accatattttctaggtgaaggaatgcatgaatccataaacaaatgagtgcagacaatctg 683

                                                                       
Query: 484 agactccactctgccacctaagctaactccttcctttcgtacttgtacggcaccaccagc 543
           || ||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 684 agtctccactctgctacctaagctaattccttcctttcttacctgtacggcaccaccagc 743

                                                                       
Query: 544 atccatgtctccaaggaaagacactagtaaaatctacttccctgtttaagtaaagaagag 603
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctccatgtctccaaggaaagacactagtaaaatctacttccctgtttaagtaaagaagag 803

                                                                 
Query: 604 taaatgcaatttaatatgaggactgagcataactcttaaataatgtccgtttaa 657
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 804 taaatgcaatttaatatgaggactgagcataactcttaaataatgtcagtttaa 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)