Query= MSMg01no055_e13.b1 MSMg01no055_e13.b1 CHROMAT_FILE:
MSMg01no055_e13.b1 PHD_FILE: MSMg01no055_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:39 2005
(270 letters)
>mm_chr15_18116453_18117122
Length = 670
Score = 445 bits (230), Expect = e-129
Identities = 242/246 (98%)
Strand = Plus / Minus
Query: 25 actgataaatttaatctggaagtagtaagtctggggatgaccttgtaaataaaggctaga 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actgataaatttaatctggaagtagtaagtctggggatgaccttgtaaataaaggctaga 411
Query: 85 aaacacaaggtaaagaaacatagcatctactaaaggggagtaagctactgcttaaagaaa 144
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 410 aaacacaaggtaaagaaacatagcatctattaaaggggagtaagctactgcttaaagaaa 351
Query: 145 gagtaaagctgattacttggggaaagtcaagtagagaaaaatgaaaagtaatataattat 204
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 350 gagtaaagctggttacttggggaaagtcgagtagagaaaaatgaaaagtaatataattat 291
Query: 205 gtttcaatttcaaaaaataatctatatgaagaattagtctcaatagagacaaaagaacat 264
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtttcaattgcaaaaaataatctatatgaagaattagtctcaatagagacaaaagaacat 231
Query: 265 ttcaga 270
||||||
Sbjct: 230 ttcaga 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_e13.g1 MSMg01no055_e13.g1 CHROMAT_FILE:
MSMg01no055_e13.g1 PHD_FILE: MSMg01no055_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:39 2005
(420 letters)
>mm_chr15_18039976_18040795
Length = 820
Score = 681 bits (352), Expect = 0.0
Identities = 403/420 (95%), Gaps = 1/420 (0%)
Strand = Plus / Plus
Query: 1 tttatacttctacgtaagtctgaaggtattaatcagaagcacatctactgacttttctct 60
|||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 201 tttatacttctaagtaagtctgaaggtgttaatcagaagcgcatctactgacttttctct 260
Query: 61 ttcaatgtgtttaccctttgctgtttgttgtctttttttttctattaatttacttgtgta 120
|||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 261 ttcaatgtgtttaccctttgctgtttatcgtctttttttttctattaatttgcttgtgta 320
Query: 121 ttctcttcacatactgatatcagtcatgcttttcttccaaacccccctcacacagatcct 180
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctcttcatatactgatatcagtcgtgcttttcttccaaacccccctcacacagatcct 380
Query: 181 cccct-attctatactccctcttggtacctgccctgggtaaaacccccaaccctaacccc 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccctcattctatactccctcttggtacctgccctgggtaaaacccccaaccctaacccc 440
Query: 240 cctgtctcatgaagtcactgcaggactaatcacatcccttcccactgaggccacacaata 299
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 441 cctgtctcatgaagtcactgcaggactaaccacatcccttcccactgaggccacacaaga 500
Query: 300 cagcccacttaggggaataagatccattggcaggcaacagattcatggagagcccctccc 359
||||||| |||||| ||||||||||||||||| |||||||||| ||||| ||||||||||
Sbjct: 501 cagcccagttagggtaataagatccattggcaagcaacagatttatggacagcccctccc 560
Query: 360 tataccagatgttgggagacatgtatgaagaccaagttgcatatctgctatgtatgtatg 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 tataccagatgttgggagacatgtatgaagaccaagttgcatatctactatgtatgtatg 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
