Query= MSMg01no057_c20.b1 MSMg01no057_c20.b1 CHROMAT_FILE:
MSMg01no057_c20.b1 PHD_FILE: MSMg01no057_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:02 2005
(622 letters)
>mm_chr15_91789024_91790045
Length = 1022
Score = 601 bits (311), Expect = e-176
Identities = 351/365 (96%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 259 catttgtcaaataattcgtgtgctcttccctggggaaggcaacctctcttgctctcactt 318
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1022 catttgccaaacaattcgtgtgctcttccctggggaaggcaacctctcttgctctcagtt 963
Query: 319 ttcctccattgcctgtaattctttgtgtagagttgaggcctcaagtgcttgctttcccct 378
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 962 ttcctccattgcctataattctttgtgtagagttgaggcctcaagcgcttgcttttccct 903
Query: 379 gtccaatggacattccatgtccactttggcatgtccattgacatagccattgtttagctc 438
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 902 gtccaatggacattccatgtccacttcggcatgtccattgacatagccattgtttagctc 843
Query: 439 atgtttga-gcacccacatgaataggaggaggtcttgttgagaggaaaaagagatttggt 497
|||||||| | ||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct: 842 atgtttgatg--cccacattagtaggagggggtcttgttgagaggaaaaagagatttggt 785
Query: 498 gagaggggtaaacaggtaagaaaaataatgggatgatatgatcaaagtatgttacatata 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gagaggggtaaacaggtaagaaaaataatgggatgatatgatcaaagtatgttacatata 725
Query: 558 tgtatgagacaatgacagaataaatgaataaaaatttaaagactggaaatacagcaagag 617
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tgtatgagacaaggacagaataaatgaataaaaatttaaagactggaaatacagcaagag 665
Query: 618 gtagg 622
|||||
Sbjct: 664 gtagg 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_c20.g1 MSMg01no057_c20.g1 CHROMAT_FILE:
MSMg01no057_c20.g1 PHD_FILE: MSMg01no057_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:02 2005
(598 letters)
>mm_chr15_91712974_91713971
Length = 998
Score = 1069 bits (553), Expect = 0.0
Identities = 590/609 (96%), Gaps = 11/609 (1%)
Strand = Plus / Plus
Query: 1 tgtaagtatttgacctttctaaggtttagccagagtaaaatcagatcaacgatttcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgtaagtatttgacctttctaaggtttagccagagtaaaatcagatcaacgatttcacaa 249
Query: 61 gctaaaatctggagagggctgaggagttggttctgtgaatggaagagcttgatacaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gctaaaatctggagagggctgaggagttggttctgtgaatggaagagcttgatacaaatg 309
Query: 121 cgtggggatatgaagtccaaagtcaaggaccatggaatagctgggaatgactgcatatgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgtggggatatgaagtccaaagtcaaggaccatggaatagctgggaatgactgcatatgc 369
Query: 181 tcataacctcaggcctctaaggtagagtaaaaagcatcactgaggcttgctggccatcta 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcataacctcaggcctctaaggcagagtaaaaagcatcactgaggcttgctggccatcta 429
Query: 241 gcctagcaaaactcagtaaaatccagattcagcaagagaacctttctcactgggataagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 430 gcctagcaaaactcagtaaaatccagattcagcaagagaacctgtctcactgggataagc 489
Query: 301 tgaggagtgactgagcaggaatcccgatgccatgctctggctcctgcaggagagtgcata 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 tgaggagtgactgagcaggaatcccgatgccatgctctggctcctataggagagtgcata 549
Query: 361 agcacatgtaacacacatgaaaattacaaaaaaaaaaaa-----------gaagaagaag 409
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 agcacatgtaacacacatgaaaattacaaaaaaaaaaaaaagaagaagaagaagaagaag 609
Query: 410 aaaacatagtttggggacggggtgatggccagcttatacttgtttggggcttcatcccaa 469
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 610 aaaacatagtttggggacggggtgatggccagcttatacttgtttggggtttcatcccaa 669
Query: 470 gcactaacatgaggaagaagaatgctcagcctggatgcattgtctataactgcaggacag 529
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 670 gcactaacacgaggaagaagaatgttcagcctggatgcattgtctataactgcaggacag 729
Query: 530 gggagggggagagagtagatcccagtgggcttactgactgatcagccaatcttcacaatt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gggagggggagagagtagatcccagtgggcttactgactgatcagccaatcttcacaatt 789
Query: 590 tggcaaact 598
|||||||||
Sbjct: 790 tggcaaact 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
