Query= MSMg01no059_j01.b1 MSMg01no059_j01.b1 CHROMAT_FILE:
MSMg01no059_j01.b1 PHD_FILE: MSMg01no059_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:06 2005
(381 letters)
>mm_chr15_78324401_78325188
Length = 788
Score = 656 bits (339), Expect = 0.0
Identities = 367/379 (96%), Gaps = 7/379 (1%)
Strand = Plus / Minus
Query: 2 gaattctccttagtgttcaagagagaagg-atctccctctgggacctggctgtccagtca 60
||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 546 gaattctccttagtgagaaagagagaaggaatctccccctgggacctggctgtccagtca 487
Query: 61 gctatgttgattgacaggtttctgagggccctaggctggaggtcagaggtagagttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gctatgttgattgacaggtttctgagggccctaggctggaggtcagaggtagagttctag 427
Query: 121 cttagatttgtctctgacattaccgagtggctagagaggttaaggacatcgccaggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttagatttgtctctgacattaccgagtggctagagaggttaaggacatcgccaggcatg 367
Query: 181 gggctccgtctccgaggctgcctgaggtaggagcttcccaccgttagctgtgtttacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gggctccgtctccgaggctgcctgaggtaggagcttcccaccgttagctgtgtttacagt 307
Query: 241 acttcagggccaaggtgggtggctgaggaaggcataactacctttgaaggtcccctttct 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 306 acttcagggccaaggtgggtggctgaggaaggcagaactacctttgaaggtcccctttct 247
Query: 301 ttc-cacactcctcag-----ctgaacagcaagaggtgaacagtggtgtgtgtgtgtgtg 354
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttcacacactcctcagctgaactgaacagcaagaggtgaacagtggtgtgtgtgtgtgtg 187
Query: 355 tgtgtgtgtgtgtgtgtgt 373
|||||||||||||||||||
Sbjct: 186 tgtgtgtgtgtgtgtgtgt 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 788
Length adjustment: 9
Effective length of query: 372
Effective length of database: 779
Effective search space: 289788
Effective search space used: 289788
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_j01.g1 MSMg01no059_j01.g1 CHROMAT_FILE:
MSMg01no059_j01.g1 PHD_FILE: MSMg01no059_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:06 2005
(249 letters)
>mm_chr15_78174638_78175286
Length = 649
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 agacaagcttggataatggggaacatcctgctgggggaagggcatgatggcattccctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacaagcttggataatggggaacatcctgctgggggaagggcatgatggcattccctga 260
Query: 61 aatgatcctccctctagtccagatggagcctccaaccctcaacctgaccaagaacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgatcctccctctagtccagatggagcctccaaccctcaacctgaccaagaacagaga 320
Query: 121 cagctacagcctgcattgggaaactcagaagatggcttactcattcattgagcacacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagctacagcctgcattgggaaactcagaagatggcttactcattcattgagcacacatt 380
Query: 181 ccaggtccagtacaagaagaaatcggacagctgggaggtgagttccaggacccaggggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaggtccagtacaagaagaaatcggacagctgggaggtgagttccaggacccaggggat 440
Query: 241 gttaca 246
||||||
Sbjct: 441 gttaca 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
