Query= MSMg01no059_k01.b1 MSMg01no059_k01.b1 CHROMAT_FILE:
MSMg01no059_k01.b1 PHD_FILE: MSMg01no059_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:10 2005
(600 letters)
>mm_chr15_35622606_35623605
Length = 1000
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Minus
Query: 5 gaattcttcacctaccgataattcattaactgtatccattatgcacttattttgtaagct 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gaattcttcacctacagataattcattaactgtatccattatgcacttattttgtaagct 619
Query: 65 ggcctaagtacttataatgcagctggtcatttaaaatacttggattacaagagtatagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggcctaagtacttataatgcagctggtcatttaaaatacttggattacaagagtatagaa 559
Query: 125 ggaacctctcttctgagcaggtgaagagaaatgagtaattagagtctatgtgtttggtag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggaacctctcttctgagcaggtgaagagaaatgagtaattagagtctatgtgtttggtag 499
Query: 185 attatgaatgtaagataatgataatggcagggtgaaggagatcaggagtgctgtggcaag 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 attatgaatgtaagaaaatgataatggcagggtgaaggagatcaggagtgctgtggcaag 439
Query: 245 tcatggaaagcttctctcagaaaatgtgtaaacgtctggaagagaaagcctttgcaaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatggaaagcttctctcagaaaatgtgtaaacgtctggaagagaaagcctttgcaaagc 379
Query: 305 tttactggcagcaatcaatcaggcatgctcaagcaacagctgacaggccaaggtagacag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttactggcagcaatcaatcaggcatgctcaagcaacagctgacaggccaaggtagacag 319
Query: 365 gaaagttagccctaggcatagaaggactaggcctgatcttagaagccttcacagctgtca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gaaagttagccctaggcatagaaggactaggcctgatcttagaagccttcacagctgtca 259
Query: 425 tctaaatgatcagctttccattgtgaggtagaggagccactcaggaatgctttt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tctaaatgatcagctttccattgtgaggtagaggagccactcaggaatgctttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_k01.g1 MSMg01no059_k01.g1 CHROMAT_FILE:
MSMg01no059_k01.g1 PHD_FILE: MSMg01no059_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:11 2005
(633 letters)
>mm_chr15_35500897_35501928
Length = 1032
Score = 1162 bits (601), Expect = 0.0
Identities = 625/633 (98%), Gaps = 2/633 (0%)
Strand = Plus / Plus
Query: 1 aattcaaattcaaccatgttaggctgatccagtgctgtagagtatgcagaactggggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcaaattcaaccatgttaggctgatccagtgctgtagagtatgcagaactggggatg 260
Query: 61 tagagaacaggaaatacatttctaaataaattagtgttaaataagcatgtatctaagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagaacaggaaatacatttctaaataaattagtgttaaataagcatgtatctaagtac 320
Query: 121 ttggtagcaacattgataaattcagaagacagtaaagaaatctttgtggaagaatcccct 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ttggtagcaacattgataaattcagaagacagtaaagtaatctttgtggaagaatcccct 380
Query: 181 tattaccattccttccattatccccactcatatttaatgagttcatacttgacctctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattaccattccttccattatccccactcatatttaatgagttcatacttgacctctttc 440
Query: 241 acaagatgatttctactgtctacttttattgtttttgatttaaaaagaaaaagtgatttg 300
||||||||| || ||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 441 acaagatgaagtccactgtctacttttattgtttttgatttaaaaggaaaa-gtgatttg 499
Query: 301 aatgatatttaaaaataattgtatatttaattttaagagcagtgattgtttctgggctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aatgatatttaaaaataattgtatatttaattttaagagcagtgattgtttctgggctct 559
Query: 361 tttttttctttagagttgaatttttatctgatacaattttatttttggcctacaccattt 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttttt-ctttagagttgaatttttatctgatacaattttatttttggcctacaccattt 618
Query: 421 ctctcataatctctcaagggtaatcttcagtagataaattacttctgtcacttcagcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctctcataatctctcaagggtaatcttcagtagataaattacttctgtcacttcagcgtt 678
Query: 481 tttgtcttatctggttcttgcataggaatagtcatttataactatattctttctaaaaag 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tttgtcttatctggttattgcataggaatagtcatttataactatattctttctaaaaag 738
Query: 541 aggaatattgccctttttcttaaagtgcctgcttcagcaacattttactttcatacagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aggaatattgccctttttcttaaagtgcctgcttcagcaacattttactttcatacagca 798
Query: 601 gtacatgcaggcttgaaattcggtgcatcctaa 633
|||||||||||||||||||||||||||||||||
Sbjct: 799 gtacatgcaggcttgaaattcggtgcatcctaa 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
