Query= MSMg01no060_a10.b1 MSMg01no060_a10.b1 CHROMAT_FILE:
MSMg01no060_a10.b1 PHD_FILE: MSMg01no060_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:40 2005
(346 letters)
>mm_chr15_34592367_34593112
Length = 746
Score = 646 bits (334), Expect = 0.0
Identities = 343/346 (99%)
Strand = Plus / Minus
Query: 1 aacagttgataaatgatagatactgagaaactaggatggaatgaaaaatccaacacatta 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aacagttggtaaatgatagatactgagaaactaggatggaatgaaaaatccaacacatta 487
Query: 61 gtaaaaggagctccagatagagactacagagagcagatgaacagcattcaaagaattact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 486 gtaaaaggagctccagatagagactacagagagcagatgaacagcattcaaagaattagt 427
Query: 121 gataacttacagcagcacacagaaaatcataaatagttgtagaaaaaagagtgcaaggaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 426 gataacttacagcagcacacagaaaatcataaatagttgtagaaaaaaaagtgcaaggaa 367
Query: 181 taacagagaacatctcagcctctcaatgaaaatgacatttcaaagtatttaatgaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 taacagagaacatctcagcctctcaatgaaaatgacatttcaaagtatttaatgaaataa 307
Query: 241 ttgtcaacccatgcatctacattcagcaaggcagatgttgtgaatatatttacatgattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttgtcaacccatgcatctacattcagcaaggcagatgttgtgaatatatttacatgattg 247
Query: 301 cagagaattaagtttctaaaaaaaagtattttaaaagctgttggta 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cagagaattaagtttctaaaaaaaagtattttaaaagctgttggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_a10.g1 MSMg01no060_a10.g1 CHROMAT_FILE:
MSMg01no060_a10.g1 PHD_FILE: MSMg01no060_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:40 2005
(416 letters)
>mm_chr15_34474252_34475067
Length = 816
Score = 741 bits (383), Expect = 0.0
Identities = 407/416 (97%), Gaps = 2/416 (0%)
Strand = Plus / Plus
Query: 3 atacaggctgattatgattgttgttcagggttttacattttggggtgattggttacacat 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 203 atacaggctgattatgattgttgttcagggttttacagtttggggtgattggttacacat 262
Query: 63 agtgacttaactagtacaggcagggacttaggtagaattacagctgcgcaccctgcgaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 263 agtgacttaactagtacaggcagggacttaggtagaattacagctgcgcaccctgggaga 322
Query: 123 gccacagggtctgagtgtttgtgctccatgctgcttccagttctgcccctttgacagcat 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 323 gccacagggtctgagtgtttgtgctccatgctgcttccagtcctgcccctttggcagcat 382
Query: 183 caacattggctccccattccccatgcctggtgtcccaagcacttcctggcacctgcccca 242
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgacattggctccccattccccatgcctggtgtcccaagcacttcctggcacctgcccca 442
Query: 243 gcactgggtaggcacggcagccaagcagctctgcttgctcttagcactctttcttggctc 302
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcactgggtaggcacagcagccaagcagctctgcttgctcttagcactctttcttggctc 502
Query: 303 tcaggcccagctggtttgggtctggaccataaggtcacagatgactttcctcctctcagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcaggcccagctggtttgggtctggaccataaggtcacagatgactttcctcctctcagg 562
Query: 363 agcttcttcatgacgagganttttttttttttttttttttttttttttt--ggcca 416
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 563 agcttcttcatgacgaggattttttttttttttttttttttttttttttttggcca 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|