Query= MSMg01no060_m05.b1 MSMg01no060_m05.b1 CHROMAT_FILE:
MSMg01no060_m05.b1 PHD_FILE: MSMg01no060_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:34 2005
(354 letters)
>mm_chr15_82951179_82951932
Length = 754
Score = 634 bits (328), Expect = 0.0
Identities = 346/352 (98%)
Strand = Plus / Minus
Query: 1 ttatttacttgttgtattggagatagagcccagggcatttccaaaagaggccagctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttatttacttgttgtattggagatagagcccagggcatttccaaaagaggccagctctct 313
Query: 61 acatctcagacttacatattatgtagatgacaggagacatgatttgctaagtttgagatg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 312 acatctcagacttacatattatgtaaatgacaggagacatgatttgctaagtttgagatg 253
Query: 121 attcgccccactccaccccctttttttctttatttcttggtctcctaatgtagtagccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attcgccccactccaccccctttttttctttatttcttggtctcctaatgtagtagccct 193
Query: 181 ggctatcccgcaactcattgtgtagtcaaggctggcttcgaactcctagatatctacccc 240
|||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggctatcctggaagtcattgtgtagtcaaggctggcttcgaactcctagatatctacccc 133
Query: 241 acatacatggacacaacacatcccatgagttctgggatttcagctatgaatcacggtgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 acatacatggacacaacacatcccatgagttctgggatttcagctatgaatcacggtgcc 73
Query: 301 tgacgggatttattattattattattattattattattattattattattat 352
||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgatgggattttttattattattattattattattattattattattattat 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_m05.g1 MSMg01no060_m05.g1 CHROMAT_FILE:
MSMg01no060_m05.g1 PHD_FILE: MSMg01no060_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:34 2005
(162 letters)
>mm_chr15_82801303_82801864
Length = 562
Score = 284 bits (147), Expect = 1e-81
Identities = 159/163 (97%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 1 acaccacagtggccgatcacaagaaagcctgtcttataaggtgagaggtgaagaccaaca 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaccacagtggccgaccacaagaaagcctgtcttataaggtgagaggtgaagaccaacg 260
Query: 61 accaagatccccctccacgctttgtatgtgtgccccggcctgggtgtacctgcacataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaagatccccctccacgctttgtatgtgtgccccggcctgggtgtacctgcacataca 320
Query: 121 aacacatactcaatgtttttcttttcttaaaaa-ggtgaagcg 162
||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 321 aacacatactcaatgtttttctttt-ttaaaaaaggtgaagcg 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
