Query= MSMg01no061_g11.b1 MSMg01no061_g11.b1 CHROMAT_FILE:
MSMg01no061_g11.b1 PHD_FILE: MSMg01no061_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:22 2005
(169 letters)
>mm_chr15_101953361_101953929
Length = 569
Score = 184 bits (95), Expect = 3e-51
Identities = 142/167 (85%), Gaps = 21/167 (12%)
Strand = Plus / Plus
Query: 4 ggaattcatgcatgtgtac-caagtgcttgaccactaaaatgctcaagcttcgaaatctg 62
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgcatgtg-aggcaagtgcttgaccactaaaatgctcaagcttcgaaatctg 262
Query: 63 agctatagcctagcagggtgacatctgctttttttttttttttttttggcttttcgagac 122
|||||||||||||||||||||||||||||||||||||||||||||| || |||| |
Sbjct: 263 agctatagcctagcagggtgacatctgctttttttttttttttttt-ggttttttg---- 317
Query: 123 agggtttctctgtgtagctctgactgccctggaacttactctgtaga 169
|||| | || ||| ||||||||||||||||||||||
Sbjct: 318 ---gttttt-tg----gct------gccctggaacttactctgtaga 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no061_g11.g1 MSMg01no061_g11.g1 CHROMAT_FILE:
MSMg01no061_g11.g1 PHD_FILE: MSMg01no061_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:22 2005
(340 letters)
>mm_chr15_102112774_102113513
Length = 740
Score = 627 bits (324), Expect = 0.0
Identities = 336/340 (98%)
Strand = Plus / Minus
Query: 1 ttctgagacccaaggagaggtagtgaattccttccagaacaggtgggtcctccaaaccca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 540 ttctgagacccaaggagaggtagtgaattccttctagaacaggtgggtcctccaaaccca 481
Query: 61 tcgcaagcacattccaggacacacccttatgccactgtcctccctcggtccttcacccca 120
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 480 tcacaagcacattccaggacacacccttatgccactgtcctcccgcggtccttcacccca 421
Query: 121 atccttcttagagaaggctcccattcccttgagaagcttgggttctgctgggaggaggaa 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atccttcttagagaaggctccgattcccttgagaagcttgggttctgctgggaggaggaa 361
Query: 181 cgacagatatgatcagaggcgaggcagggaggggcccacaaaactggtgttccaactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgacagatatgatcagaggcgaggcagggaggggcccacaaaactggtgttccaactggt 301
Query: 241 acagtttcctgccacgatgacttgctagcctttacctaggctgggtggggaagaatcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acagtttcctgccacgatgacttgctagcctttacctaggctgggtggggaagaatcagg 241
Query: 301 tacagacaagacatctcagtccctcaccctttaccactct 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tacagacaagacatctcagtccctcaccctttaccactct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
