Query= MSMg01no061_o16.b1 MSMg01no061_o16.b1 CHROMAT_FILE:
MSMg01no061_o16.b1 PHD_FILE: MSMg01no061_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:01 2005
(607 letters)
>mm_chr15_38142774_38143780
Length = 1007
Score = 1065 bits (551), Expect = 0.0
Identities = 587/601 (97%), Gaps = 4/601 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaggtgttcccgagaccttggatatgggcgctggaaccaaactgtacaggagca 63
|||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaggtggtcctgagaccttggataagggcgctggaaccaaactgtacaggagca 263
Query: 64 gtgtgcctcttaactgctgagtcatctctctagcccttctttgttctgtgttttgagacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgtgcctcttaactgctgagtcatctctctagcccttctttgttctgtgttttgagacc 323
Query: 124 tactccctgtaattcaggctttaagtaaataaatctgtcttttatcaagtcctcatgggg 183
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 324 tactccctgtaattcaggctttaagtaaataaatctctcttttatcaagtcctcatgggg 383
Query: 184 ctgaaatattaaagggaggtaaagcacgtgagctaatgcattcataagaacaccgtcatc 243
||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 384 ctgaaatattaaaggaaggtaaagcacgtgagctaatgtattcataagaacgccgtcatc 443
Query: 244 caagccaatcgagggcatctgagcacctatgtgcccgttgtgcaggctcacttgccccaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caagccaatcgagggcatctgagcacctatgtgcccgttgtgcaggctcacttgccccaa 503
Query: 304 gattttctgccaaatgcagatgtggatgagagcttttccagagtttaagtgctgagattc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gattttctgccaaatgcagatgtggatgagagcttttccagagtttaagtgctgagattc 563
Query: 364 cagccccacgcaaatgattcttgccctagggatgctgttcttggatagtcttcctggcat 423
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagccccatggaaatgattcttgccctagggatgctgttcttggatagtcttcctggcat 623
Query: 424 ttctgatcattttcccttaacatgagtcaccatctttgttccacacccaaaggccttcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 ttctgatcattttcccttaacatgagtcaccatctttgttccacacccaaacgccttcag 683
Query: 484 tatgacagctgctcttgatgcaccaggatctattctgggggaacatcacggctcacatga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatgacagctgctcttgatgcaccaggatctattctgggggaacatcacggctcacatga 743
Query: 544 gatcatgtcctctgggacagcagctacctcacctccaagctcagcctggagtggtctctg 603
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 744 gatcatgtcctctgggacagcagctacctcacctccaagctcag----gagtggtctctg 799
Query: 604 a 604
|
Sbjct: 800 a 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_o16.g1 MSMg01no061_o16.g1 CHROMAT_FILE:
MSMg01no061_o16.g1 PHD_FILE: MSMg01no061_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:01 2005
(342 letters)
>mm_chr15_38273241_38273983
Length = 743
Score = 395 bits (204), Expect = e-114
Identities = 210/212 (99%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 1 ccaatttgctcctaacccttcctggatggaagttgtttacttgatctcagcacaaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ccaatttgctcctaacccttcctggatggaagttgtttacttgatctcagcacaaacaga 353
Query: 61 tgggggtggggtggctggggagagccctctgggtctggagaacaagaaagaacagttaaa 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 352 tgggggtggggtggctggggagagccctctgggtctggagaacaaaaaagaacagttaaa 293
Query: 121 ggagctttctcttgggcagaaagggcccagttagtttatctttcttgaaagctctggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggagctttctcttgggcagaaagggcccagttagtttatctttcttgaaagctctggcaa 233
Query: 181 agcctgtggtccagacacactcatct-ctgtg 211
|||||||||||||||||||||||||| |||||
Sbjct: 232 agcctgtggtccagacacactcatctgctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
