Query= MSMg01no063_o19.b1 MSMg01no063_o19.b1 CHROMAT_FILE:
MSMg01no063_o19.b1 PHD_FILE: MSMg01no063_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:28 2005
(312 letters)
>mm_chr15_26285733_26286446
Length = 714
Score = 572 bits (296), Expect = e-168
Identities = 306/310 (98%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggttcagtgagaaagcctgtctggaaaatataaggtagaaaagtaagagaag 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 580 gaattccaggttcagtgagaaagcctgtctggaaaatataaggtagaaaagtaacagaag 521
Query: 65 aggacattaacatgagaatttcctatagggagcacatatacctgtccccacacggactat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aggacattaacatgagaatttcctatagggagcacatatacctgtccccacacggactat 461
Query: 125 cccctacaccagcacagcacggagggagacaggaatgtctttggtctctggcttcctatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cccctacaccagcacagcacggagggagacaggaatgtctttggtctctggcttcctatt 401
Query: 185 tcatggtgggatttcccctg--ctcatctgtactccatctctgatgcccttgaccacgtt 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 400 tcatggtgggatttcccctgtactcatctgtactccatctctgatgcccttgaccatgtt 341
Query: 243 gtgatgcagccaaggaacccctcaccaagttctggctccacattcctggactttcaagat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtgatgcagccaaggaacccctcaccaagttctggctccacattcctggactttcaagat 281
Query: 303 actgagctaa 312
||||||||||
Sbjct: 280 actgagctaa 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 714
Length adjustment: 9
Effective length of query: 303
Effective length of database: 705
Effective search space: 213615
Effective search space used: 213615
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_o19.g1 MSMg01no063_o19.g1 CHROMAT_FILE:
MSMg01no063_o19.g1 PHD_FILE: MSMg01no063_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:29 2005
(280 letters)
>mm_chr15_26133931_26134610
Length = 680
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%)
Strand = Plus / Plus
Query: 1 attccgagggcagaaagagtgagactcatggataacttgccttttgtgaaatagcatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccgagggcagaaagagtgagactcatggataacttgccttttgtgaaatagcatctt 260
Query: 61 tttgtgcatagatatgagtaatacgatcttcatgttgatctcaaattcactctttgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgcatagatatgagtaatacgatcttcatgttgatctcaaattcactctttgtata 320
Query: 121 aatactctgtaatatttctatgtgagatttgtttcaaatagtctaggggcctcgggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatactctgtaatatttctatgtgagatttgtttcaaatagtctaggggcctcgggtggt 380
Query: 181 tggcgtggctacagatgagagtgaattgtcaaaacaaaaaatatatcaagcttcatttct 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tggcgtggctacagatgagagtgaattgtcaaaacaaaagatatatcaagcttcatttct 440
Query: 241 atgcttatacatgtctgaagcttttcatacccagtgagca 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgcttatacatgtctgaagcttttcatacccagtgagca 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
