Query= MSMg01no063_p01.b1 MSMg01no063_p01.b1 CHROMAT_FILE:
MSMg01no063_p01.b1 PHD_FILE: MSMg01no063_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:30 2005
(479 letters)
>mm_chr15_93188996_93189875
Length = 880
Score = 646 bits (334), Expect = 0.0
Identities = 395/428 (92%), Gaps = 25/428 (5%)
Strand = Plus / Minus
Query: 5 gaattctactcctgcgacacacccaagaggaccggaatcaatgactcaagatta-tttat 63
|||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 408 gaattctactccagtgacacacccaagaggactggaatcaatgactcaagattattttat 349
Query: 64 gactcatgcccacagcatcactgttcaaagcatccaaaatggggaggcaacccgggcaag 123
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 348 gactcatgcccacagcatcactgttcaaagcatccaaaatgaggaggcaacccgggcaag 289
Query: 124 tctgtggtgatccgtcttcattacctactctatgagattcagaatcgccctagaaacaca 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 288 tctgtggtgatccgtcttcattacctactctatgagattcagaatcgcccgagaaacaca 229
Query: 184 catcggtgtgagcattaccggagagtgggcagcgccactccttaagtggagattctggat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 catcggtgtgagcattaccggagagtgggcagcgccactccttaagtggagattctggat 169
Query: 244 cgaatacaaaggagagatcgtgctgagagccagcgttctctcccctctccttcccaactg 303
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cgaataaaaaggagaaatcgtgctgagagccagcgttctctcccctctccttcccaactg 109
Query: 304 tgggcacagtatgagcagctcgcgcatgcctgctgctgtgtctttcctgccatgatggac 363
||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 108 tgggcacagtatgagcagctcgc----------------gtctttcctg--a-gatggac 68
Query: 364 agtgagaaga----ccacccgcctcttcctgatggggattttgtcgtgtttctttttgta 419
|||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 67 agtgagaagacccgcca-ccgccccttcctgatggggattttgtcgtgtttctttttgta 9
Query: 420 ggcgtaag 427
||||||||
Sbjct: 8 ggcgtaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_p01.g1 MSMg01no063_p01.g1 CHROMAT_FILE:
MSMg01no063_p01.g1 PHD_FILE: MSMg01no063_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:30 2005
(360 letters)
>mm_chr15_93131272_93132032
Length = 761
Score = 688 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Plus
Query: 1 atcagttaggctagactggctgcctaggaggccgcagagagtcgcctaacagtcctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atcagttaggctagactggctgcctaggaggccgcagagagtcgcctaacagtcctccac 261
Query: 61 actgggatcacaagtacgcactagaaagcctggcttttgtgtgaggactgagaactgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actgggatcacaagtacgcactagaaagcctggcttttgtgtgaggactgagaactgacc 321
Query: 121 tcgggtcctcagatttttgcggcaaacactgtactgacggagccgtcccccgtccccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcgggtcctcagatttttgcggcaaacactgtactgacggagccgtcccccgtccccccc 381
Query: 181 ccttaatttccctgtaatgaagctgatgctttcattttcctgaactgcgcgttgttttct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcttaatttccctgtaatgaagctgatgctttcattttcctgaactgcgcgttgttttct 441
Query: 241 ggcttttattttgttaaccttcatcccttactactttgttctatctcatcttaggtttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggcttttattttgttaaccttcatcccttactactttgttctatctcatcttaggtttat 501
Query: 301 cttgtcagtctctatcctatgtgttatttacatatttaatcttattggatttttctagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cttgtcagtctctatcctatgtgttatttacatatttaatcttattggatttttctagac 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 761
Length adjustment: 9
Effective length of query: 351
Effective length of database: 752
Effective search space: 263952
Effective search space used: 263952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
