Query= MSMg01no064_l17.b1 MSMg01no064_l17.b1 CHROMAT_FILE:
MSMg01no064_l17.b1 PHD_FILE: MSMg01no064_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:54 2005
(420 letters)
>mm_chr15_58816748_58817567
Length = 820
Score = 685 bits (354), Expect = 0.0
Identities = 372/378 (98%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 19 tcagggaaggtggaagggcctggtgttgaggccctgggcctagactaccaaagcattgga 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcagggaaggtggaagggcctggtgttgaggccctgggcctagactaccaaagcattgga 319
Query: 79 aactctggagaagggccagcgcgagtactctcccattaaactgaatatcaggctccagcg 138
||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||
Sbjct: 318 aactctggagaagggccagtgtgagtactctcccatcaaactgaatatcaggctccagcg 259
Query: 139 ctcaccaggctggggaaggagggggaaccatctcagactcccctcagcttctctttcacc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctcaccaggctggggaaggagggggaaccatctcagactcccctcagcttctctttcacc 199
Query: 199 ctcagcttctctttcaccctcagcttctctttcaccctcagcttctctctcatagctgtc 258
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 198 ctcagcttctctttcaccctcagcttctctttcaccctcagcttctctttcatagctgtc 139
Query: 259 ccaagagcagagaccaaagctgtgctgacagctgggattctttgaggctgtaacatttaa 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ccaagagcagagaccaaagctgtgctgacagctgggattctttgaggctgtaacatttaa 79
Query: 319 gtttaagtgtaaatgcacatgtggatagctttacatatcaaccatt-cccccgctcagag 377
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 78 gtttaagtgtaaatgcacatgtggatagctttacatatcaaccattccccccgcacagag 19
Query: 378 tcgcaagcggttggcgta 395
||||||||||||||||||
Sbjct: 18 tcgcaagcggttggcgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_l17.g1 MSMg01no064_l17.g1 CHROMAT_FILE:
MSMg01no064_l17.g1 PHD_FILE: MSMg01no064_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:54 2005
(126 letters)
>mm_chr15_58652255_58652780
Length = 526
Score = 213 bits (110), Expect = 4e-60
Identities = 122/126 (96%)
Strand = Plus / Plus
Query: 1 atactaagcaagtctagttatccccttaactacgggattggggataaaacttaagggggc 60
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 201 atactaagcaagtctagttatccccttaactacgtgattgggaataaaacttaagtgggc 260
Query: 61 accaaggcacgctaaaaactgacgcagcagcacctctaagggtcactgactcggaagcta 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 accaaggcacgctaaaaactgacgcagcagcacctctaagtgtcactgactcggaagcta 320
Query: 121 gccaga 126
||||||
Sbjct: 321 gccaga 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
