Query= MSMg01no066_j13.b1 MSMg01no066_j13.b1 CHROMAT_FILE:
MSMg01no066_j13.b1 PHD_FILE: MSMg01no066_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:26 2005
(290 letters)
>mm_chr15_41301972_41302662
Length = 691
Score = 509 bits (263), Expect = e-148
Identities = 284/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 ctctccagctatgcggacctacctgaaggaagagaacagtactgtcaggcactacagttc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 201 ctctccagctatgcggacctacctgaaggaagagaaccgtactgtcaggcactgcagttc 260
Query: 61 tgctgtggattggtttcctttctgcaatgtgatcctttagtttctccttctggaaaggaa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgtggattggtttcctttctgcaacgtgatcctttagtttctccttctggaaaggaa 320
Query: 121 gcttatggtcttagtatttgaaatagaaaaatcttccaataaggcactagctcttacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttatggtcttagtatttgaaatagaaaaatcttccaataaggcactagctcttacatt 380
Query: 181 tcctagttgacaaaaacgaggtgttctcagtaaaggttcttattggtggacattgaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctagttgacaaaaacgaggtgttctcagtaaaggttcttattggtggacattgaagag 440
Query: 241 acctatgat-tgtttttcagtagtatttcagaagaggtttatgcatgaata 290
|||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctaggagatgtttttcagtagtatttcagaagaggtttatgcatgaata 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_j13.g1 MSMg01no066_j13.g1 CHROMAT_FILE:
MSMg01no066_j13.g1 PHD_FILE: MSMg01no066_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:26 2005
(468 letters)
>mm_chr15_41432493_41433360
Length = 868
Score = 897 bits (464), Expect = 0.0
Identities = 467/468 (99%)
Strand = Plus / Minus
Query: 1 ctaaactggactcatgccaaaatgaagccaatcagcacacatatccatttattccttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ctaaactggactcatgccaaaatgaagccaatcagcacacatatccatttattccttcac 609
Query: 61 atgtcgttttatttaaatctgactctgtggacttagaataatttaaaagtggaaccaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgtcgttttatttaaatctgactctgtggacttagaataatttaaaagtggaaccaatt 549
Query: 121 cggtatgagttgacaggggatcctcaggaccccaggagtggtcctggatttcagttagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cggtatgagttgacaggggatcctcaggaccccaggagtggtcctggatttcagttagct 489
Query: 181 agaagtggtatcaactggcggtggggatgtcctgaaacttgggccccttaataagctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agaagtggtatcaactggcggtggggatgtcctgaaacttgggccccttaataagctgtt 429
Query: 241 gccaattgtggataccagagtgcttccctcattatcacacagagagatactggcactgac 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 428 gccaattgtggataccagagtgcttccctcattttcacacagagagatactggcactgac 369
Query: 301 aatgctgaggagaagactaatagaatccagggacaatttccatctctacattccacaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatgctgaggagaagactaatagaatccagggacaatttccatctctacattccacaatg 309
Query: 361 cttttgattttcaccattgatgggtgttttgtgtctgaataagcttcttacgtcatggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cttttgattttcaccattgatgggtgttttgtgtctgaataagcttcttacgtcatggcc 249
Query: 421 aactttccagtctacgagcatctgctggaaataaaataggtgagaagg 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aactttccagtctacgagcatctgctggaaataaaataggtgagaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
