Query= MSMg01no067_k14.b1 MSMg01no067_k14.b1 CHROMAT_FILE:
MSMg01no067_k14.b1 PHD_FILE: MSMg01no067_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:49 2005
(224 letters)
>mm_chr15_102765440_102766063
Length = 624
Score = 354 bits (183), Expect = e-102
Identities = 208/221 (94%), Gaps = 8/221 (3%)
Strand = Plus / Plus
Query: 1 gcttttctttccgccgcgtcctgtagaggagagaggggcgggagaaagaaaagggacccg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gcttttctttccgccgcgtcctgtagaggagagaggggcgggagaaagaaaagggaaact 260
Query: 61 agaatctcctgtgattctgtctgcgttttgtagcgtaggctattttctagatatttaact 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agaatctcctgtgattctgtctgcgttttgtagcgtaggctattttccagatatttaact 320
Query: 121 atcacctacgttcgttcatattctctctctctctctctctctctctctctctctgtgtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 atcacctacgttcgttcatattctctctctctctctctctctctctctctctgtgtgtgt 380
Query: 181 gtgtgtgtgtgtgcgtgtgtgtgcgcgcgcgcgtgtgtgtg 221
||||||||||||||| ||||||||||||||||||
Sbjct: 381 gtgtgtgtgtgtgcg--------cgcgcgcgcgtgtgtgtg 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_k14.g1 MSMg01no067_k14.g1 CHROMAT_FILE:
MSMg01no067_k14.g1 PHD_FILE: MSMg01no067_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:50 2005
(234 letters)
>mm_chr15_102923474_102924106
Length = 633
Score = 422 bits (218), Expect = e-122
Identities = 230/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 tgattttcagttcttcagacatattagtctttgtttcatgttgccacctgaggagcttgc 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 433 tgattttcagttcttcagacatattagtctttgtttcatgttgggacctgaggagcttgc 374
Query: 61 ctgggcacagatagggaggagactggactgtctaggcccaacccagtcttactacccttc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgggcacagatagggaggagacaggactgtctaggcccaacccagtcttactacccttc 314
Query: 121 tccaagatccctgagagaaagagcagggatttggatgattgaatgtgtccaactttctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tccaagatccctgagagaaagagcagggatttggatgattgaatgtgtccaactttctcc 254
Query: 181 taataatttccattaagtaattgagtgattgctgctagttcctttaaaaacaaa 234
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 253 taataatttccattaagtaa-tgagtgattgctgctagttcctttaaaaacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
