Query= MSMg01no068_a09.b1 MSMg01no068_a09.b1 CHROMAT_FILE:
MSMg01no068_a09.b1 PHD_FILE: MSMg01no068_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:18 2005
(319 letters)
>mm_chr15_24306493_24307211
Length = 719
Score = 592 bits (306), Expect = e-173
Identities = 309/310 (99%)
Strand = Plus / Plus
Query: 8 ggaattcctaggaggcctcaactttactcaaaacaactatagacaacaaagtattgccta 67
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 208 ggaattcctaggaggcctcaactttactcaaaacaactatagacaaccaagtattgccta 267
Query: 68 gagccagagaaatagtcttccctaggagagactacactgcttatccattttaattcttta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gagccagagaaatagtcttccctaggagagactacactgcttatccattttaattcttta 327
Query: 128 atggttattattgaatagttcaattttcaatttactatttagcatagcttatttttttct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atggttattattgaatagttcaattttcaatttactatttagcatagcttatttttttct 387
Query: 188 cctgaaatcttgaagcttttgtgtttgtttcaagataatgtgtaacttctcactgaaaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cctgaaatcttgaagcttttgtgtttgtttcaagataatgtgtaacttctcactgaaaag 447
Query: 248 gaaccatttacgatgaaaattgtttcacccttgatggctgttcctcctctaactagtctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaaccatttacgatgaaaattgtttcacccttgatggctgttcctcctctaactagtctc 507
Query: 308 agtgttgtag 317
||||||||||
Sbjct: 508 agtgttgtag 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_a09.g1 MSMg01no068_a09.g1 CHROMAT_FILE:
MSMg01no068_a09.g1 PHD_FILE: MSMg01no068_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:19 2005
(270 letters)
>mm_chr15_24422521_24423195
Length = 675
Score = 474 bits (245), Expect = e-138
Identities = 266/275 (96%), Gaps = 5/275 (1%)
Strand = Plus / Minus
Query: 1 tgatttaggaaataaatcaggaacccaatttatgtgatcaatattagcatcaaggagatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 475 tgatttaggaaataaatcaggaacccaatttatgtgatcaatattagcatcaaggatatg 416
Query: 61 ----ctttacagagatgctatgttctggctcctaaaagaggaaaaaaaaaacatcaaaac 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggctctttacagagatgctatgttctggctcctaaaagaggaaaaaaaaaacatcaaaac 356
Query: 117 aaacctaaaaggtagcca-ttttgtgtaagattaaaagaagcggttgtttttcacagctt 175
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 355 aaacctaaaaggtagccatttttgtgtaagattaaaagaagtggttgtttttcacagctt 296
Query: 176 ttcagttatttcttattggtggaagtttgttacaatccttattaccaaaagacatgtaaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttcagttatttcttattggtggaagtttgttacaatccttattaccaaaagacatgtaaa 236
Query: 236 attagactccatgttattagtcatgttcctgtggg 270
|||||||||||||||| ||| ||||||||||||||
Sbjct: 235 attagactccatgttagtagccatgttcctgtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 675
Length adjustment: 9
Effective length of query: 261
Effective length of database: 666
Effective search space: 173826
Effective search space used: 173826
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
