Query= MSMg01no068_d06.b1 MSMg01no068_d06.b1 CHROMAT_FILE:
MSMg01no068_d06.b1 PHD_FILE: MSMg01no068_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:33 2005
(232 letters)
>mm_chr15_47475723_47476352
Length = 630
Score = 391 bits (202), Expect = e-113
Identities = 224/232 (96%), Gaps = 2/232 (0%)
Strand = Plus / Minus
Query: 1 atgtggttaacaaaaataactcaagtgggatctttattcaatctatatttagcacaattt 60
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 430 atgtgattaacaaaaataactcaaatgggatctttattcaatctatatttagcacaattt 371
Query: 61 ttaggagttattatgatctccaaaaattactttaatttatttgtgtgtttccatctacac 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 370 ttaggagttattatgatctccaaaaattactttaatttatt--tgtgtttccatctacac 313
Query: 121 agatatcagactattatgccaaaagttctgggatttctggagtatttggcttatttgact 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 312 agatatcagactattatgccaaaagttctgggatttctggagtatttggtttatttgact 253
Query: 181 aaattcacttctgaaatgtatgtttttttaaaattcaaagatttatacctag 232
|||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct: 252 aaattcacttctgaaatgaaggtttctttaaaattcaaagatttatacctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 630
Length adjustment: 9
Effective length of query: 223
Effective length of database: 621
Effective search space: 138483
Effective search space used: 138483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_d06.g1 MSMg01no068_d06.g1 CHROMAT_FILE:
MSMg01no068_d06.g1 PHD_FILE: MSMg01no068_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:33 2005
(238 letters)
>mm_chr15_47352062_47352699
Length = 638
Score = 418 bits (216), Expect = e-121
Identities = 228/232 (98%)
Strand = Plus / Plus
Query: 4 gttgaaaggtttggctatgcagaatttaaggacctgaattctcttttcagtgctctgagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 gttgaaaggtttggctatgcagaatttaaggacctgaattctcttttcagtactctgagt 263
Query: 64 ctcaatgaaaagtctctactcacaggagaattcgagtgaatgttgctaatcaaggatggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcaatgaaaagtctctactcacaggagaattcgagtgaatgttgctaatcaaggatggg 323
Query: 124 ataaagacagagatgactgttcctttggtcaagataaaaaattggaaactcagacaaaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataaagacagagatgactgttcctttggtcaagataaaaaattggaaactcagacaaaac 383
Query: 184 agacacatactggaggtctcgtctagccacagacagctttgatgactatcta 235
||||||| |||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 384 agacacagactggaggccccgtctagccacagacagctttgatgactatcta 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
