Query= MSMg01no070_g01.b1 MSMg01no070_g01.b1 CHROMAT_FILE:
MSMg01no070_g01.b1 PHD_FILE: MSMg01no070_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:25 2005
(241 letters)
>mm_chr15_30579050_30579690
Length = 641
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Plus
Query: 1 aaatattcatttaaagacttcttcatgcaaattgccactggtgggtttgagttcagaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatattcatttaaagacttcttcatgcaaattgccactggtgggtttgagttcagaatt 260
Query: 61 atcctgtcagcgtatatgaaggatggattcgagtaagatctcgagttccatttggaaaat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcctgtcagagtatatgaaggatggattcgagtaagatctcgagttccatttggaaaat 320
Query: 121 catgacccatggccaaagagagatatcagagatggactatagtatgtgtgagctcataga 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 321 catgacccatggccaaagagagttatcagagatggactatagtatgtgtgagctcacaga 380
Query: 181 cagccaagcttacataccctgcatctgatgccctgtgtttgaatctcttccaagtatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagccaagcttacataccctgcatctgatgccctgtgtttgaatctcttccaagtatcat 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_g01.g1 MSMg01no070_g01.g1 CHROMAT_FILE:
MSMg01no070_g01.g1 PHD_FILE: MSMg01no070_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:25 2005
(437 letters)
>mm_chr15_30707876_30708714
Length = 839
Score = 698 bits (361), Expect = 0.0
Identities = 434/495 (87%), Gaps = 58/495 (11%)
Strand = Plus / Minus
Query: 1 tgtgtaaccctcccatctctcccagtcttcaggtgcttgctgatcttcaaagtatagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tgtgtaaccctcccatctctcccagtcttcaggtgcttgctgatcttcaaagtatagcca 761
Query: 61 cttacatgtcctaccctgggttgggacacctggagggatgcaaagctcactttagtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cttacatgtcctaccctgggttgggacacctggagggatgcaaagctcactttagtcatt 701
Query: 121 ggacactgcccagcagacgctgcccagcaga----------------------------- 151
|||||||||||||||||||||||||||||||
Sbjct: 700 ggacactgcccagcagacgctgcccagcagacgctgcccagcagacgctgcccagcagac 641
Query: 152 ----------------t-----------gctgctgagcacagactcctcagctttcctgc 184
| |||||||||||||||||||||||||||||||
Sbjct: 640 gctgcccagcagacgctgcccagcagacgctgctgagcacagactcctcagctttcctgt 581
Query: 185 acggcagggaacttcaaagatgctcaccctcactgtcagcttcatctgctccctaggaaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gcggcagggaacttcaaagatgctcaccctcactgtcagcttcatctgctccctaggaaa 521
Query: 245 aggtagatggccggctttcatctgttgatttagggaagtgagttcaagactttgtactgt 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 520 aggtagatggccggctttcatctgttgatttagggaagtgagtccaagactttgtactgt 461
Query: 305 aagttccagcatcattttgaacaaaactgaatttcttgacttcattattgtaaaaaacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aagttccagcatcattttgaacaaaactgaatttcttgacttcattattgtaaaaaacac 401
Query: 365 catgataaggaatggggg--gggggagctatgatttatggctctctgtgtagaggagatt 422
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 catgataaggaatgggggtggggggagctatgatttatggctctctgtgtagaggagatt 341
Query: 423 taattctgccttctg 437
|||||||||||||||
Sbjct: 340 taattctgccttctg 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 839
Length adjustment: 9
Effective length of query: 428
Effective length of database: 830
Effective search space: 355240
Effective search space used: 355240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
